RNA–Protein interactions for RNA: ENST00000390520.1

TRAJ17-201, Transcript of T cell receptor alpha joining 17, humanhuman

APPRIS P1 BASIC

Gene TRAJ17, Length 63 nt, Biotype TR J gene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ17-201ENST00000390520 HTR3AP46098 478 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 TRPC1P48995 793 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 SARSP49591 514 aaKnown RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PRIM1P49642 420 aaKnown RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF131P52739 623 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 SATB1Q01826 763 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 MCL1Q07820 350 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 RASA3Q14644 834 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 TOMM20Q15388 145 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 ZNF394Q53GI3 561 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 DACT2Q5SW24 774 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PPP4R3AQ6IN85 833 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 CFAP161Q6P656 301 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L2Q6R6M4 530 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 USP17L1Q7RTZ2 530 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 TTC30AQ86WT1 665 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 HOMER1Q86YM7 354 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 BRSK2Q8IWQ3 736 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PLPP6Q8IY26 295 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 MYO1HQ8N1T3 1032 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 APPL2Q8NEU8 664 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 SPIRE2Q8WWL2 714 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 JARID2Q92833 1246 aaPredicted RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 C22orf23Q9BZE7 217 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PRKD2Q9BZL6 878 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 CSRNP2Q9H175 543 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 HMX1Q9NP08 348 aaPredicted RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 ANO2Q9NQ90 1003 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 RNF19AQ9NV58 838 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 RBM28Q9NW13 759 aaKnown RBP4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 SNTG2Q9NY99 539 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 VTI1BQ9UEU0 232 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 IP6K2Q9UHH9 426 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PCDHB8Q9UN66 801 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 PCDHB13Q9Y5F0 798 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 WASHC2AQ641Q2 1341 aa4.09□□□□□ -1.75
TRAJ17-201ENST00000390520 DCAF8L1A6NGE4 600 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 NCAM1P13591 858 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 LMNB1P20700 586 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 TNNT2P45379 298 aaPredicted RBP4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 FKBP4Q02790 459 aaKnown RBP eCLIP4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 DSC3Q14574 896 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 E2F5Q15329 346 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 PUM3Q15397 648 aaKnown RBP4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 SLC4A8Q2Y0W8 1093 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 SPECC1Q5M775 1068 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 CCDC158Q5M9N0 1113 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 KSR2Q6VAB6 950 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 NFXL1Q6ZNB6 911 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 TMC7Q7Z402 723 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 C11orf74Q86VG3 221 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 RASSF3Q86WH2 238 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 ACRBPQ8NEB7 543 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 ATXN2LQ8WWM7 1075 aaKnown RBP4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 NELL1Q92832 810 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 CENPTQ96BT3 561 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 IWS1Q96ST2 819 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 MAP3K14Q99558 947 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 FEZ1Q99689 392 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 PAIP2Q9BPZ3 127 aaKnown RBP4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 C2orf49Q9BVC5 232 aaPredicted RBP4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 XPO4Q9C0E2 1151 aaKnown RBP4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 TMEM260Q9NX78 707 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 PCDHGB7Q9Y5F8 929 aa4.08□□□□□ -1.76
TRAJ17-201ENST00000390520 RAD54L2Q9Y4B4 1467 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 ESYT3A0FGR9 886 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 FAM170AA1A519 330 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 FAM221BA6H8Z2 402 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 TRIM6-TRIM34B2RNG4 842 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 C19orf81C9J6K1 198 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 hCG_1984214I3L0E3 225 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 PES1O00541 588 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 EPB42P16452 691 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 VARSP26640 1264 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 OAS2P29728 719 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 ST13P50502 369 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 HMGN5P82970 282 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 PTPN12Q05209 780 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 SFSWAPQ12872 951 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 OCLNQ16625 522 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 KIAA1614Q5VZ46 1190 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 JAKMIP3Q5VZ66 844 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 LARP1Q6PKG0 1096 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 MMS22LQ6ZRQ5 1243 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 C16orf86Q6ZW13 317 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 OTUD6AQ7L8S5 288 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 ARHGEF25Q86VW2 580 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 DZIP3Q86Y13 1208 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 KIAA0825Q8IV33 1275 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 ANKMY2Q8IV38 441 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 OSCARQ8IYS5 282 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 LILRB2Q8N423 598 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 ANKRD42Q8N9B4 389 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 ZNF579Q8NAF0 562 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 TRPM4Q8TD43 1214 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 RPGRQ92834 1020 aaKnown RBP4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 CCDC34Q96HJ3 373 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 DEPDC7Q96QD5 511 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 NELL2Q99435 816 aa4.07□□□□□ -1.76
TRAJ17-201ENST00000390520 HERPUD2Q9BSE4 406 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms