RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
LINC00654-201ENST00000379053 PABPN1LA6NDY0 278 aaKnown RBP12.58□□□□□ -0.4
LINC00654-201ENST00000379053 CCDC184Q52MB2 194 aa12.58□□□□□ -0.4
LINC00654-201ENST00000379053 TNNI2P48788 182 aa12.58□□□□□ -0.4
LINC00654-201ENST00000379053 PANK2Q9BZ23 570 aa12.58□□□□□ -0.4
LINC00654-201ENST00000379053 LRRC27Q9C0I9 530 aa12.58□□□□□ -0.4
LINC00654-201ENST00000379053 EIF3JO75822 258 aaKnown RBP12.58□□□□□ -0.4
LINC00654-201ENST00000379053 STX6O43752 255 aa12.58□□□□□ -0.4
LINC00654-201ENST00000379053 ZFYP08048 801 aaPredicted RBP12.58□□□□□ -0.4
LINC00654-201ENST00000379053 NEK1Q96PY6 1258 aa12.58□□□□□ -0.4
LINC00654-201ENST00000379053 LARP6Q9BRS8 491 aaKnown RBP12.58□□□□□ -0.4
LINC00654-201ENST00000379053 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00654-201ENST00000379053 SFPQP23246 707 aaKnown RBP eCLIP12.57□□□□□ -0.4
LINC00654-201ENST00000379053 HOOK2Q96ED9 719 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 NUP88Q99567 741 aaPredicted RBP12.57□□□□□ -0.4
LINC00654-201ENST00000379053 PPFIA3O75145 1194 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 PDE6BP35913 854 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 NCBP1Q09161 790 aaKnown RBP12.57□□□□□ -0.4
LINC00654-201ENST00000379053 HEATR3Q7Z4Q2 680 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 CCDC91Q7Z6B0 441 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 TRIM27P14373 513 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 MCM5P33992 734 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 ANKRD36BQ8N2N9 1353 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 PLCG2P16885 1265 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 NFATC2IPQ8NCF5 419 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 TCHPQ9BT92 498 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 MMRN2Q9H8L6 949 aa12.57□□□□□ -0.4
LINC00654-201ENST00000379053 CCNL1Q9UK58 526 aaPredicted RBP12.57□□□□□ -0.4
LINC00654-201ENST00000379053 LPXNO60711 386 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 RBM17Q96I25 401 aaKnown RBP12.56□□□□□ -0.4
LINC00654-201ENST00000379053 FERMT1Q9BQL6 677 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 BACH2Q9BYV9 841 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 PHACTR2O75167 634 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 ZNF354CQ86Y25 554 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 FSIP1Q8NA03 581 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 KIAA0754O94854 1291 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 TOP1P11387 765 aaKnown RBP12.56□□□□□ -0.4
LINC00654-201ENST00000379053 IL15P40933 162 aaPredicted RBP12.56□□□□□ -0.4
LINC00654-201ENST00000379053 GNAQP50148 359 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 LUZP1Q86V48 1076 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 PYM1Q9BRP8 204 aaKnown RBP12.56□□□□□ -0.4
LINC00654-201ENST00000379053 CCDC113Q9H0I3 377 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 SYNCQ9H7C4 482 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 PPIP5K1Q6PFW1 1433 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 KDM5BQ9UGL1 1544 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 IRS4O14654 1257 aaPredicted RBP12.56□□□□□ -0.4
LINC00654-201ENST00000379053 USO1O60763 962 aaKnown RBP12.56□□□□□ -0.4
LINC00654-201ENST00000379053 SLC9C2Q5TAH2 1124 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 OTUD7BQ6GQQ9 843 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 CPLX3Q8WVH0 158 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 ANKRD2Q9GZV1 360 aa12.56□□□□□ -0.4
LINC00654-201ENST00000379053 YEATS4O95619 227 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 USP37Q86T82 979 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 CNBD1Q8NA66 436 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 CNNM2Q9H8M5 875 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 MAGEB6P1A0A0J9YX57 407 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 GRM8O00222 908 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 TSHZ3Q63HK5 1081 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 HMG20BQ9P0W2 317 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 RHPN1Q8TCX5 695 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 PLCD4Q9BRC7 762 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 ASXL2Q76L83 1435 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
LINC00654-201ENST00000379053 KLF18A0A0U1RQI7 1052 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 KSR2Q6VAB6 950 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 TMTC2Q8N394 836 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 C6orf50Q9HD87 102 aa12.55□□□□□ -0.4
LINC00654-201ENST00000379053 NAPAP54920 295 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 SYCE3A1L190 88 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 ZBTB43O43298 467 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 FAM114A1Q8IWE2 563 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 HELBQ8NG08 1087 aaPredicted RBP12.54□□□□□ -0.4
LINC00654-201ENST00000379053 MCM9Q9NXL9 1143 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 DYDC1Q8WWB3 177 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 SPDYE3A6NKU9 549 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 KIF5CO60282 957 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 ALDH1L1O75891 902 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 GCP02774 474 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 CALM1P0DP23 149 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 CALM2P0DP24 149 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 CALM3P0DP25 149 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 TAF12Q16514 161 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 QTRT2Q9H974 415 aaKnown RBP12.54□□□□□ -0.4
LINC00654-201ENST00000379053 LDHBP07195 334 aaKnown RBP12.54□□□□□ -0.4
LINC00654-201ENST00000379053 DCAF5Q96JK2 942 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 GOPCQ9HD26 462 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 EXOC1Q9NV70 894 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 PCDH11XQ9BZA7 1347 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 PCDH11YQ9BZA8 1340 aa12.54□□□□□ -0.4
LINC00654-201ENST00000379053 TMCO5BA8MYB1 307 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 ZSCAN12O43309 604 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 LRSAM1Q6UWE0 723 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 CCDC102AQ96A19 550 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 JAG2Q9Y219 1238 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 RTN1Q16799 776 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 PLEKHH1Q9ULM0 1364 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 CTAGE5O15320 804 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 PRKAG2Q9UGJ0 569 aa12.53□□□□□ -0.4
LINC00654-201ENST00000379053 NOD1Q9Y239 953 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms