RNA–Protein interactions for RNA: ENST00000377387.5

SF1-203, Transcript of splicing factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SF1, Length 2,947 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-203ENST00000377387 DBNLQ9UJU6 430 aaKnown RBP21.55■■□□□ 1.04
SF1-203ENST00000377387 NPHP4O75161 1426 aaPredicted RBP21.54■■□□□ 1.04
SF1-203ENST00000377387 HEG1Q9ULI3 1381 aa21.54■■□□□ 1.04
SF1-203ENST00000377387 HSP90B1P14625 803 aaKnown RBP21.54■■□□□ 1.04
SF1-203ENST00000377387 SASS6Q6UVJ0 657 aa21.54■■□□□ 1.04
SF1-203ENST00000377387 DDX46Q7L014 1031 aaKnown RBP21.54■■□□□ 1.04
SF1-203ENST00000377387 FUCA2Q9BTY2 467 aa21.54■■□□□ 1.04
SF1-203ENST00000377387 NOLC1Q14978 699 aaKnown RBP eCLIP21.53■■□□□ 1.04
SF1-203ENST00000377387 SLC52A2Q9HAB3 445 aa21.53■■□□□ 1.04
SF1-203ENST00000377387 CEBPZQ03701 1054 aaKnown RBP21.53■■□□□ 1.04
SF1-203ENST00000377387 FAM177BA6PVY3 158 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 TAF5LO75529 589 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 DBNDD2Q9BQY9 259 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 DACT1Q9NYF0 836 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 TERF1P54274 439 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 FGD1P98174 961 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 SPATA32Q96LK8 384 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 METTL22Q9BUU2 404 aaPredicted RBP21.52■■□□□ 1.04
SF1-203ENST00000377387 UTYO14607 1347 aa21.52■■□□□ 1.04
SF1-203ENST00000377387 CCDC192P0DO97 292 aa21.52■■□□□ 1.03
SF1-203ENST00000377387 LUZP1Q86V48 1076 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 TTC5Q8N0Z6 440 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 NUP62CLQ9H1M0 184 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 LMO7Q8WWI1 1683 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 ERBB3P21860 1342 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 A0A087WZG4 1122 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 TNNI3KQ59H18 835 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 NAP1L2Q9ULW6 460 aaPredicted RBP21.51■■□□□ 1.03
SF1-203ENST00000377387 FPGT-TNNI3KV9GXZ4 949 aa21.51■■□□□ 1.03
SF1-203ENST00000377387 PTPN12Q05209 780 aaKnown RBP21.5■■□□□ 1.03
SF1-203ENST00000377387 NEUROD6Q96NK8 337 aa21.5■■□□□ 1.03
SF1-203ENST00000377387 NPHP3Q7Z494 1330 aa21.5■■□□□ 1.03
SF1-203ENST00000377387 TATP17735 454 aaPredicted RBP21.5■■□□□ 1.03
SF1-203ENST00000377387 PIBF1Q8WXW3 757 aa21.5■■□□□ 1.03
SF1-203ENST00000377387 PDCP20941 246 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 ANKRD1Q15327 319 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 Q6ZUG5 572 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 MAP3K11Q16584 847 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 COL15A1P39059 1388 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 NCAPD2Q15021 1401 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 PHKG2P15735 406 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 BICD2Q8TD16 824 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 NEK1Q96PY6 1258 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 TNMDQ9H2S6 317 aa21.49■■□□□ 1.03
SF1-203ENST00000377387 CRYBG1Q9Y4K1 1723 aa21.48■■□□□ 1.03
SF1-203ENST00000377387 MED23Q9ULK4 1368 aa21.48■■□□□ 1.03
SF1-203ENST00000377387 USP54Q70EL1 1684 aa21.48■■□□□ 1.03
SF1-203ENST00000377387 TYRO3Q06418 890 aa21.47■■□□□ 1.03
SF1-203ENST00000377387 BRF1Q92994 677 aa21.47■■□□□ 1.03
SF1-203ENST00000377387 H3BQV1 296 aa21.47■■□□□ 1.03
SF1-203ENST00000377387 IFFO2Q5TF58 517 aa21.47■■□□□ 1.03
SF1-203ENST00000377387 LMBR1LQ6UX01 489 aa21.47■■□□□ 1.03
SF1-203ENST00000377387 PYCARDQ9ULZ3 195 aa21.47■■□□□ 1.03
SF1-203ENST00000377387 RGPD5Q99666 1765 aa21.47■■□□□ 1.03
SF1-203ENST00000377387 HSPA2P54652 639 aa21.46■■□□□ 1.03
SF1-203ENST00000377387 CYP21A2P08686 494 aa21.46■■□□□ 1.03
SF1-203ENST00000377387 LEO1Q8WVC0 666 aaPredicted RBP21.46■■□□□ 1.03
SF1-203ENST00000377387 MRVI1Q9Y6F6 885 aa21.46■■□□□ 1.03
SF1-203ENST00000377387 NR1I2O75469 434 aa21.45■■□□□ 1.03
SF1-203ENST00000377387 SNRPA1P09661 255 aaKnown RBP21.45■■□□□ 1.03
SF1-203ENST00000377387 ATP5JP18859 108 aa21.45■■□□□ 1.03
SF1-203ENST00000377387 RFX5P48382 616 aaPredicted RBP21.45■■□□□ 1.03
SF1-203ENST00000377387 TIMM10P62072 90 aa21.45■■□□□ 1.03
SF1-203ENST00000377387 ANO6Q4KMQ2 910 aa21.45■■□□□ 1.03
SF1-203ENST00000377387 COPRSQ9NQ92 184 aa21.45■■□□□ 1.03
SF1-203ENST00000377387 DRC7Q8IY82 874 aa21.45■■□□□ 1.02
SF1-203ENST00000377387 KCNF1Q9H3M0 494 aa21.45■■□□□ 1.02
SF1-203ENST00000377387 DYNC1I1O14576 645 aa21.45■■□□□ 1.02
SF1-203ENST00000377387 KDM6AO15550 1401 aaPredicted RBP21.44■■□□□ 1.02
SF1-203ENST00000377387 A0A0G2JLW4 131 aa21.44■■□□□ 1.02
SF1-203ENST00000377387 GOLIM4O00461 696 aa21.44■■□□□ 1.02
SF1-203ENST00000377387 CHST3Q7LGC8 479 aa21.44■■□□□ 1.02
SF1-203ENST00000377387 IFNL2Q8IZJ0 200 aa21.44■■□□□ 1.02
SF1-203ENST00000377387 SCAND2PQ9GZW5 306 aaPredicted RBP21.44■■□□□ 1.02
SF1-203ENST00000377387 HMG20BQ9P0W2 317 aa21.44■■□□□ 1.02
SF1-203ENST00000377387 ATF3P18847 181 aa21.44■■□□□ 1.02
SF1-203ENST00000377387 CCT2P78371 535 aaKnown RBP21.44■■□□□ 1.02
SF1-203ENST00000377387 C19orf44Q9H6X5 657 aa21.44■■□□□ 1.02
SF1-203ENST00000377387 FAM200AQ8TCP9 573 aa21.43■■□□□ 1.02
SF1-203ENST00000377387 PGBD1Q96JS3 809 aa21.43■■□□□ 1.02
SF1-203ENST00000377387 SNRKQ9NRH2 765 aa21.43■■□□□ 1.02
SF1-203ENST00000377387 CYP27B1O15528 508 aa21.43■■□□□ 1.02
SF1-203ENST00000377387 PTGS1P23219 599 aa21.43■■□□□ 1.02
SF1-203ENST00000377387 FTOQ9C0B1 505 aaKnown RBP eCLIP21.43■■□□□ 1.022e-6■■■■□ 23.1
SF1-203ENST00000377387 C1orf167Q5SNV9 1468 aa21.43■■□□□ 1.02
SF1-203ENST00000377387 ZNF609O15014 1411 aa21.43■■□□□ 1.02
SF1-203ENST00000377387 MCMDC2Q4G0Z9 681 aa21.42■■□□□ 1.02
SF1-203ENST00000377387 GTF3C6Q969F1 213 aa21.42■■□□□ 1.02
SF1-203ENST00000377387 ZMYND15Q9H091 742 aa21.42■■□□□ 1.02
SF1-203ENST00000377387 CABP4P57796 275 aa21.42■■□□□ 1.02
SF1-203ENST00000377387 GUCY1B3Q02153 619 aa21.42■■□□□ 1.02
SF1-203ENST00000377387 CBX8Q9HC52 389 aa21.42■■□□□ 1.02
SF1-203ENST00000377387 APOBRQ0VD83 1088 aa21.41■■□□□ 1.02
SF1-203ENST00000377387 SCRN1Q12765 414 aa21.41■■□□□ 1.02
SF1-203ENST00000377387 STOX1Q6ZVD7 989 aa21.41■■□□□ 1.02
SF1-203ENST00000377387 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
SF1-203ENST00000377387 FMNL2Q96PY5 1086 aa21.41■■□□□ 1.02
SF1-203ENST00000377387 DNAJC25Q9H1X3 360 aa21.41■■□□□ 1.02
SF1-203ENST00000377387 KRT32Q14532 448 aa21.41■■□□□ 1.02
SF1-203ENST00000377387 NCOA5Q9HCD5 579 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms