RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 EXOC5O00471 708 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 RRP9O43818 475 aaKnown RBP13.81□□□□□ -0.2
DDR1-227ENST00000376570 IL2RBP14784 551 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 CCDC173Q0VFZ6 552 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 ME3Q16798 604 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 SASS6Q6UVJ0 657 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 NEK1Q96PY6 1258 aa13.81□□□□□ -0.2
DDR1-227ENST00000376570 DBNLQ9UJU6 430 aaKnown RBP13.81□□□□□ -0.2
DDR1-227ENST00000376570 KRT85P78386 507 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 ZSCAN30Q86W11 494 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 RASSF8Q8NHQ8 419 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 DCAF5Q96JK2 942 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 METTL22Q9BUU2 404 aaPredicted RBP13.8□□□□□ -0.2
DDR1-227ENST00000376570 FTOQ9C0B1 505 aaKnown RBP eCLIP13.8□□□□□ -0.2
DDR1-227ENST00000376570 SLAIN2Q9P270 581 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 LRP2BPQ9P2M1 347 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 SETBP1Q9Y6X0 1596 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 ERBB4Q15303 1308 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 A0A1B0GUL7 405 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 STARD3NLO95772 234 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 MBD3O95983 291 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 TNNI3KQ59H18 835 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 RAI14Q9P0K7 980 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 FPGT-TNNI3KV9GXZ4 949 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 CDC37L1Q7L3B6 337 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 CCDC171Q6TFL3 1326 aa13.8□□□□□ -0.2
DDR1-227ENST00000376570 CEP170BQ9Y4F5 1589 aaPredicted RBP13.79□□□□□ -0.2
DDR1-227ENST00000376570 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 ZSCAN22P10073 491 aaPredicted RBP13.79□□□□□ -0.2
DDR1-227ENST00000376570 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.79□□□□□ -0.2
DDR1-227ENST00000376570 TSC1Q92574 1164 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 PTCH1Q13635 1447 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 A0A0G2JLW4 131 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 hCG_1642624A0A1W2PR95 340 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 SLC27A2O14975 620 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 GJB4Q9NTQ9 266 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 CRB1P82279 1406 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 PPLO60437 1756 aa13.79□□□□□ -0.2
DDR1-227ENST00000376570 STK38Q15208 465 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 C8orf37Q96NL8 207 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 TPCN1Q9ULQ1 816 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 AK9Q5TCS8 1911 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 TDO2P48775 406 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 SYNE3Q6ZMZ3 975 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 CMTR1Q8N1G2 835 aaKnown RBP13.78□□□□□ -0.2
DDR1-227ENST00000376570 PI4K2BQ8TCG2 481 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 PAG1Q9NWQ8 432 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 GOLGA8BA8MQT2 603 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 SLC9C2Q5TAH2 1124 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 CCDC73Q6ZRK6 1079 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 NGLY1Q96IV0 654 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 ZDHHC9Q9Y397 364 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
DDR1-227ENST00000376570 ATP6V1AP38606 617 aa13.77□□□□□ -0.2
DDR1-227ENST00000376570 MEX3CQ5U5Q3 659 aaKnown RBP13.77□□□□□ -0.2
DDR1-227ENST00000376570 DACT1Q9NYF0 836 aa13.77□□□□□ -0.2
DDR1-227ENST00000376570 COL3A1P02461 1466 aaPredicted RBP13.77□□□□□ -0.21
DDR1-227ENST00000376570 MARCKSP29966 332 aaPredicted RBP13.77□□□□□ -0.21
DDR1-227ENST00000376570 AIDAQ96BJ3 306 aa13.77□□□□□ -0.21
DDR1-227ENST00000376570 INCENPQ9NQS7 918 aa13.77□□□□□ -0.21
DDR1-227ENST00000376570 TMEM131LA2VDJ0 1609 aa13.77□□□□□ -0.21
DDR1-227ENST00000376570 DHX16O60231 1041 aaKnown RBP13.77□□□□□ -0.21
DDR1-227ENST00000376570 BRPF1P55201 1214 aaPredicted RBP13.77□□□□□ -0.21
DDR1-227ENST00000376570 FAM177A1Q8N128 213 aaPredicted RBP13.77□□□□□ -0.21
DDR1-227ENST00000376570 PREX1Q8TCU6 1659 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 HSPA4P34932 840 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 PDILTQ8N807 584 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 TMX1Q9H3N1 280 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 RAD50Q92878 1312 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 ARHGEF28Q8N1W1 1705 aaKnown RBP13.76□□□□□ -0.21
DDR1-227ENST00000376570 F13A1P00488 732 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 ZAP70P43403 619 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 NUP62CLQ9H1M0 184 aa13.76□□□□□ -0.21
DDR1-227ENST00000376570 ZHX1Q9UKY1 873 aaPredicted RBP13.76□□□□□ -0.21
DDR1-227ENST00000376570 HIP1O00291 1037 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 PRDM1O75626 825 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 ATP2B3Q16720 1220 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 LSG1Q9H089 658 aaKnown RBP13.75□□□□□ -0.21
DDR1-227ENST00000376570 KLF18A0A0U1RQI7 1052 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 ADCY5O95622 1261 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 ADCY9O60503 1353 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 IRS4O14654 1257 aaPredicted RBP13.75□□□□□ -0.21
DDR1-227ENST00000376570 LUZP1Q86V48 1076 aa13.75□□□□□ -0.21
DDR1-227ENST00000376570 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
DDR1-227ENST00000376570 ATP10DQ9P241 1426 aa13.74□□□□□ -0.21
DDR1-227ENST00000376570 MCMDC2Q4G0Z9 681 aa13.74□□□□□ -0.21
DDR1-227ENST00000376570 NIP7Q9Y221 180 aaKnown RBP eCLIP13.74□□□□□ -0.21
DDR1-227ENST00000376570 DIP2BQ9P265 1576 aa13.74□□□□□ -0.21
DDR1-227ENST00000376570 KINO60870 393 aaKnown RBP13.74□□□□□ -0.21
DDR1-227ENST00000376570 SMC2O95347 1197 aa13.74□□□□□ -0.21
DDR1-227ENST00000376570 SPECC1Q5M775 1068 aa13.74□□□□□ -0.21
DDR1-227ENST00000376570 TPM2P07951 284 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 ITGA6P23229 1130 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 AKAP17AQ02040 695 aaKnown RBP13.73□□□□□ -0.21
DDR1-227ENST00000376570 TRIM29Q14134 588 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 ZBTB1Q9Y2K1 713 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 ANKRD18BA2A2Z9 1011 aa13.73□□□□□ -0.21
DDR1-227ENST00000376570 ZNF213O14771 459 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms