RNA–Protein interactions for RNA: ENST00000371217.9

TCTN3-203, Transcript of tectonic family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCTN3, Length 2,514 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCTN3-203ENST00000371217 TAF5LO75529 589 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 LEO1Q8WVC0 666 aaPredicted RBP11.71□□□□□ -0.53
TCTN3-203ENST00000371217 HMG20BQ9P0W2 317 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 KIF3AQ9Y496 699 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 KIF13AQ9H1H9 1805 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 LTN1O94822 1766 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 NPHP4O75161 1426 aaPredicted RBP11.71□□□□□ -0.53
TCTN3-203ENST00000371217 ADGRL3Q9HAR2 1447 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 ANO6Q4KMQ2 910 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 EPHA10Q5JZY3 1008 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 MYD88Q99836 296 aa11.71□□□□□ -0.53
TCTN3-203ENST00000371217 ALDH8A1Q9H2A2 487 aaPredicted RBP11.71□□□□□ -0.53
TCTN3-203ENST00000371217 MED23Q9ULK4 1368 aa11.71□□□□□ -0.54
TCTN3-203ENST00000371217 NEURL1BA8MQ27 555 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 JAK2O60674 1132 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 PTGS1P23219 599 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 GTF2F1P35269 517 aaKnown RBP eCLIP11.7□□□□□ -0.54
TCTN3-203ENST00000371217 GCKRQ14397 625 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 COPS6Q7L5N1 327 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 DRC7Q8IY82 874 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 BICD2Q8TD16 824 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 XAGE3Q8WTP9 111 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 CBX8Q9HC52 389 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 NDUFB9Q9Y6M9 179 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 NPHP3Q7Z494 1330 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 HSP90B1P14625 803 aaKnown RBP11.7□□□□□ -0.54
TCTN3-203ENST00000371217 CHAF1AQ13111 956 aaPredicted RBP11.7□□□□□ -0.54
TCTN3-203ENST00000371217 TSGA10IPQ3SY00 556 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 NEK1Q96PY6 1258 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 DDX19AQ9NUU7 478 aaKnown RBP11.7□□□□□ -0.54
TCTN3-203ENST00000371217 AXIN2Q9Y2T1 843 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 NCAPD2Q15021 1401 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 USP54Q70EL1 1684 aa11.7□□□□□ -0.54
TCTN3-203ENST00000371217 NR1I2O75469 434 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 KRT32Q14532 448 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 ZNF790Q6PG37 636 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 ZNF710Q8N1W2 664 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 DDX11Q96FC9 970 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 ORAI2Q96SN7 254 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 H3BQV1 296 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 TFCP2Q12800 502 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 IFFO2Q5TF58 517 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 CCDC129Q6ZRS4 1044 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 DNAJC2Q99543 621 aaKnown RBP11.69□□□□□ -0.54
TCTN3-203ENST00000371217 TRIM5Q9C035 493 aa11.69□□□□□ -0.54
TCTN3-203ENST00000371217 CHGBP05060 677 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 ATP5JP18859 108 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 FGD1P98174 961 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 Q6ZUG5 572 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 BRF1Q92994 677 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 GTF3C6Q969F1 213 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 PGBD1Q96JS3 809 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 CCDC94Q9BW85 323 aaPredicted RBP11.68□□□□□ -0.54
TCTN3-203ENST00000371217 CLSTN2Q9H4D0 955 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 DBNLQ9UJU6 430 aaKnown RBP11.68□□□□□ -0.54
TCTN3-203ENST00000371217 PIP4K2AP48426 406 aaPredicted RBP11.68□□□□□ -0.54
TCTN3-203ENST00000371217 TNNI3KQ59H18 835 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 USPL1Q5W0Q7 1092 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 SEC62Q99442 399 aaKnown RBP11.68□□□□□ -0.54
TCTN3-203ENST00000371217 METTL22Q9BUU2 404 aaPredicted RBP11.68□□□□□ -0.54
TCTN3-203ENST00000371217 LRRC2Q9BYS8 371 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 CCDC9Q9Y3X0 531 aaKnown RBP11.68□□□□□ -0.54
TCTN3-203ENST00000371217 FPGT-TNNI3KV9GXZ4 949 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 LMO7Q8WWI1 1683 aa11.68□□□□□ -0.54
TCTN3-203ENST00000371217 CEBPZQ03701 1054 aaKnown RBP11.67□□□□□ -0.54
TCTN3-203ENST00000371217 ANKRD13DQ6ZTN6 518 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 ANKLE2Q86XL3 938 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 NFATC2IPQ8NCF5 419 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 NRBP1Q9UHY1 535 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 RIOK3O14730 519 aaKnown RBP11.67□□□□□ -0.54
TCTN3-203ENST00000371217 ZNF165P49910 485 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 RESTQ13127 1097 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 DNAJC25Q9H1X3 360 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 BCL2L12Q9HB09 334 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 COPRSQ9NQ92 184 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 U3KPZ7 1027 aaPredicted RBP11.67□□□□□ -0.54
TCTN3-203ENST00000371217 RGPD2P0DJD1 1756 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 COL15A1P39059 1388 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 OVOS2A0A0G2JMS6 1433 aa11.67□□□□□ -0.54
TCTN3-203ENST00000371217 FOSBP53539 338 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 PTPN12Q05209 780 aaKnown RBP11.66□□□□□ -0.54
TCTN3-203ENST00000371217 LRMPQ12912 555 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 UBE3BQ7Z3V4 1068 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 CYP21A2P08686 494 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 ZNF75DP51815 510 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
TCTN3-203ENST00000371217 MCMDC2Q4G0Z9 681 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 RBM43Q6ZSC3 357 aaKnown RBP11.66□□□□□ -0.54
TCTN3-203ENST00000371217 DDX46Q7L014 1031 aaKnown RBP11.66□□□□□ -0.54
TCTN3-203ENST00000371217 RAPGEF4Q8WZA2 1011 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 DBNDD2Q9BQY9 259 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 SLC52A2Q9HAB3 445 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 CFAP45Q9UL16 551 aa11.66□□□□□ -0.54
TCTN3-203ENST00000371217 RFX5P48382 616 aaPredicted RBP11.65□□□□□ -0.54
TCTN3-203ENST00000371217 ZNF496Q96IT1 587 aaPredicted RBP11.65□□□□□ -0.54
TCTN3-203ENST00000371217 ZSCAN16Q9H4T2 348 aaPredicted RBP11.65□□□□□ -0.54
TCTN3-203ENST00000371217 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
TCTN3-203ENST00000371217 JCADQ9P266 1359 aa11.65□□□□□ -0.54
TCTN3-203ENST00000371217 ATP5J2-PTCD1G3V325 749 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms