RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SLC26A8Q96RN1 970 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 GUCY1B3Q02153 619 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 IQCB1Q15051 598 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 TERF2Q15554 542 aa14.47□□□□□ -0.09
PHGDH-201ENST00000369407 PSMA5P28066 241 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 HSP90AB4PQ58FF6 505 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 GPATCH3Q96I76 525 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 PROSER3Q2NL68 480 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 CCDC129Q6ZRS4 1044 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.46□□□□□ -0.09
PHGDH-201ENST00000369407 KRT222Q8N1A0 295 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 GOLPH3LQ9H4A5 285 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 MAP3K2Q9Y2U5 619 aa14.46□□□□□ -0.09
PHGDH-201ENST00000369407 RBM6P78332 1123 aaKnown RBP14.46□□□□□ -0.1
PHGDH-201ENST00000369407 RBM43Q6ZSC3 357 aaKnown RBP14.46□□□□□ -0.1
PHGDH-201ENST00000369407 CCAR1Q8IX12 1150 aaKnown RBP14.46□□□□□ -0.1
PHGDH-201ENST00000369407 ZNF397Q8NF99 534 aaPredicted RBP14.46□□□□□ -0.1
PHGDH-201ENST00000369407 KCNB2Q92953 911 aa14.46□□□□□ -0.1
PHGDH-201ENST00000369407 CHMP4CQ96CF2 233 aa14.46□□□□□ -0.1
PHGDH-201ENST00000369407 PRAMEF22A3QJZ6 481 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 SASH1O94885 1247 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 GABPB1Q06547 395 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-201ENST00000369407 GORABQ5T7V8 394 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 GTF3C6Q969F1 213 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 KDRP35968 1356 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 IRX5P78411 483 aaPredicted RBP14.45□□□□□ -0.1
PHGDH-201ENST00000369407 AIMP1Q12904 312 aaKnown RBP14.45□□□□□ -0.1
PHGDH-201ENST00000369407 SYCP1Q15431 976 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 TAOK2Q9UL54 1235 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 SBNO1A3KN83 1393 aa14.45□□□□□ -0.1
PHGDH-201ENST00000369407 PLEKHG3A1L390 1219 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 CCZ1BP86790 482 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 CCZ1P86791 482 aaPredicted RBP14.44□□□□□ -0.1
PHGDH-201ENST00000369407 RESTQ13127 1097 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 ERCC6LQ2NKX8 1250 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 AOPEPQ8N6M6 819 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 FMNL2Q96PY5 1086 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 NEO1Q92859 1461 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 EIF4A1P60842 406 aaKnown RBP14.44□□□□□ -0.1
PHGDH-201ENST00000369407 SEC62Q99442 399 aaKnown RBP14.44□□□□□ -0.1
PHGDH-201ENST00000369407 ZNF446Q9NWS9 450 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 USP31Q70CQ4 1352 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 ITSN1Q15811 1721 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 USP42Q9H9J4 1324 aaKnown RBP14.44□□□□□ -0.1
PHGDH-201ENST00000369407 Q6ZUG5 572 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 NYAP1Q6ZVC0 841 aa14.44□□□□□ -0.1
PHGDH-201ENST00000369407 ERBB3P21860 1342 aa14.43□□□□□ -0.1
PHGDH-201ENST00000369407 HOXC9P31274 260 aa14.43□□□□□ -0.1
PHGDH-201ENST00000369407 FAM208AQ9UK61 1670 aaKnown RBP14.43□□□□□ -0.1
PHGDH-201ENST00000369407 ADCY9O60503 1353 aa14.43□□□□□ -0.1
PHGDH-201ENST00000369407 SLFNL1Q499Z3 407 aa14.43□□□□□ -0.1
PHGDH-201ENST00000369407 RNF20Q5VTR2 975 aa14.43□□□□□ -0.1
PHGDH-201ENST00000369407 CCAR2Q8N163 923 aaKnown RBP14.43□□□□□ -0.1
PHGDH-201ENST00000369407 TRIM34Q9BYJ4 488 aa14.43□□□□□ -0.1
PHGDH-201ENST00000369407 RGPD1P0DJD0 1748 aa14.43□□□□□ -0.1
PHGDH-201ENST00000369407 SETD1AO15047 1707 aaKnown RBP14.43□□□□□ -0.1
PHGDH-201ENST00000369407 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
PHGDH-201ENST00000369407 CCT2P78371 535 aaKnown RBP14.42□□□□□ -0.1
PHGDH-201ENST00000369407 MPRIPQ6WCQ1 1025 aa14.42□□□□□ -0.1
PHGDH-201ENST00000369407 DHX40Q8IX18 779 aaKnown RBP14.42□□□□□ -0.1
PHGDH-201ENST00000369407 G3BP1Q13283 466 aaKnown RBP eCLIP14.42□□□□□ -0.11e-6■■■□□ 18.8
PHGDH-201ENST00000369407 ANKRD1Q15327 319 aa14.42□□□□□ -0.1
PHGDH-201ENST00000369407 SYT10Q6XYQ8 523 aa14.42□□□□□ -0.1
PHGDH-201ENST00000369407 SUCLG2Q96I99 432 aa14.42□□□□□ -0.1
PHGDH-201ENST00000369407 PTPN21Q16825 1174 aa14.42□□□□□ -0.1
PHGDH-201ENST00000369407 BICC1Q9H694 974 aaKnown RBP14.42□□□□□ -0.1
PHGDH-201ENST00000369407 NPHP4O75161 1426 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-201ENST00000369407 AKAP12Q02952 1782 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 STX1AQ16623 288 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 USP28Q96RU2 1077 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 NRXN3Q9Y4C0 1643 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 BIN1O00499 593 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 ME1P48163 572 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 SCRN1Q12765 414 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 ISM2Q6H9L7 571 aa14.41□□□□□ -0.1
PHGDH-201ENST00000369407 NCOA5Q9HCD5 579 aaKnown RBP14.41□□□□□ -0.1
PHGDH-201ENST00000369407 SLU7O95391 586 aaKnown RBP14.4□□□□□ -0.1
PHGDH-201ENST00000369407 MRFAP1L1Q96HT8 127 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 TAF5LO75529 589 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 SMC2O95347 1197 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 CHST3Q7LGC8 479 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 ERO1AQ96HE7 468 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 NEK1Q96PY6 1258 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 KINO60870 393 aaKnown RBP14.4□□□□□ -0.1
PHGDH-201ENST00000369407 CDC25BP30305 580 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 CCDC73Q6ZRK6 1079 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 FSIP1Q8NA03 581 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 KAZALD1Q96I82 304 aa14.4□□□□□ -0.1
PHGDH-201ENST00000369407 DNAJC2Q99543 621 aaKnown RBP14.4□□□□□ -0.1
PHGDH-201ENST00000369407 BTBD11A6QL63 1104 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 IRX3P78415 501 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-201ENST00000369407 SNW1Q13573 536 aaKnown RBP14.39□□□□□ -0.11
PHGDH-201ENST00000369407 COL15A1P39059 1388 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 PXDNLA1KZ92 1463 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 RICTORQ6R327 1708 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 A0A0G2JLW4 131 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 A0A1B0GVL5 298 aa14.39□□□□□ -0.11
PHGDH-201ENST00000369407 ADD1P35611 737 aaKnown RBP14.39□□□□□ -0.11
PHGDH-201ENST00000369407 E4F1Q66K89 784 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-201ENST00000369407 SARM1Q6SZW1 724 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms