RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 ANO6Q4KMQ2 910 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 BEND3Q5T5X7 828 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 CREB3L3Q68CJ9 461 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 BLOC1S2Q6QNY1 142 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 CCDC186Q7Z3E2 898 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 NCOA5Q9HCD5 579 aaKnown RBP10.54□□□□□ -0.72
THBS3-201ENST00000368378 SNRKQ9NRH2 765 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 PHF8Q9UPP1 1060 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 HAND2P61296 217 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 CHRNA2Q15822 529 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 OTUD7BQ6GQQ9 843 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 SASS6Q6UVJ0 657 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 UBE3BQ7Z3V4 1068 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 INTS4Q96HW7 963 aaKnown RBP10.54□□□□□ -0.72
THBS3-201ENST00000368378 GPATCH3Q96I76 525 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 MTMR6Q9Y217 621 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 KAT6BQ8WYB5 2073 aa10.54□□□□□ -0.72
THBS3-201ENST00000368378 A0A0G2JLW4 131 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 ARID5BQ14865 1188 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 PPP4R3BQ5MIZ7 849 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 FAM184AQ8NB25 1140 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 RUFY2Q8WXA3 655 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 C19orf44Q9H6X5 657 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 SLAIN2Q9P270 581 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 HSP90AA4PQ58FG1 418 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 NUP62CLQ9H1M0 184 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 FAM208AQ9UK61 1670 aaKnown RBP10.53□□□□□ -0.72
THBS3-201ENST00000368378 ZNF500O60304 480 aaPredicted RBP10.53□□□□□ -0.72
THBS3-201ENST00000368378 CSPP1Q1MSJ5 1256 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 NFATC2IPQ8NCF5 419 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 BRF1Q92994 677 aa10.53□□□□□ -0.72
THBS3-201ENST00000368378 XRN1Q8IZH2 1706 aaKnown RBP10.52□□□□□ -0.72
THBS3-201ENST00000368378 STRCQ7RTU9 1775 aa10.52□□□□□ -0.72
THBS3-201ENST00000368378 BIN1O00499 593 aa10.52□□□□□ -0.72
THBS3-201ENST00000368378 KRT85P78386 507 aa10.52□□□□□ -0.72
THBS3-201ENST00000368378 COPS6Q7L5N1 327 aa10.52□□□□□ -0.72
THBS3-201ENST00000368378 NR1I2O75469 434 aa10.52□□□□□ -0.73
THBS3-201ENST00000368378 ADAMTS2O95450 1211 aa10.52□□□□□ -0.73
THBS3-201ENST00000368378 POLA2Q14181 598 aa10.52□□□□□ -0.73
THBS3-201ENST00000368378 EPHA10Q5JZY3 1008 aa10.52□□□□□ -0.73
THBS3-201ENST00000368378 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
THBS3-201ENST00000368378 ATP6V1DQ9Y5K8 247 aa10.52□□□□□ -0.73
THBS3-201ENST00000368378 SASH1O94885 1247 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 CCDC192P0DO97 292 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 U2AF2P26368 475 aaKnown RBP eCLIP10.51□□□□□ -0.73
THBS3-201ENST00000368378 ST3GAL1Q11201 340 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 CHAF1AQ13111 956 aaPredicted RBP10.51□□□□□ -0.73
THBS3-201ENST00000368378 XAGE3Q8WTP9 111 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 TIMM10P62072 90 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 IP6K1Q92551 441 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 GJB4Q9NTQ9 266 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 CCDC171Q6TFL3 1326 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 SLC27A2O14975 620 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 MAP3K11Q16584 847 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 CERKQ8TCT0 537 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 TTC14Q96N46 770 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
THBS3-201ENST00000368378 DBF4Q9UBU7 674 aaPredicted RBP10.51□□□□□ -0.73
THBS3-201ENST00000368378 RIOK3O14730 519 aaKnown RBP10.5□□□□□ -0.73
THBS3-201ENST00000368378 POLR3DP05423 398 aaPredicted RBP10.5□□□□□ -0.73
THBS3-201ENST00000368378 FKBP4Q02790 459 aaKnown RBP eCLIP10.5□□□□□ -0.73
THBS3-201ENST00000368378 TYRO3Q06418 890 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 TFCP2Q12800 502 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 ZNF594Q96JF6 807 aaPredicted RBP10.5□□□□□ -0.73
THBS3-201ENST00000368378 ADCY9O60503 1353 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 VGLL3A8MV65 326 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 GOLIM4O00461 696 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 MAPK8IP2Q13387 824 aaPredicted RBP10.5□□□□□ -0.73
THBS3-201ENST00000368378 HSP90AB4PQ58FF6 505 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 Q6ZUG5 572 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 KCNF1Q9H3M0 494 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
THBS3-201ENST00000368378 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 KIF3AQ9Y496 699 aa10.5□□□□□ -0.73
THBS3-201ENST00000368378 AOX1Q06278 1338 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 GRM8O00222 908 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 RXRAP19793 462 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 APOBRQ0VD83 1088 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 GORABQ5T7V8 394 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 VPS53Q5VIR6 699 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 DBNDD2Q9BQY9 259 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 USP16Q9Y5T5 823 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 CACNA1FO60840 1977 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 BECN2A8MW95 431 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 NEXNQ0ZGT2 675 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 TPD52L1Q16890 204 aaPredicted RBP10.49□□□□□ -0.73
THBS3-201ENST00000368378 PLEKHO1Q53GL0 409 aaPredicted RBP10.49□□□□□ -0.73
THBS3-201ENST00000368378 CADPS2Q86UW7 1296 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 ANKRD24Q8TF21 1146 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 NWD1Q149M9 1564 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 ZNF165P49910 485 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 CCDC144CPQ8IYA2 1237 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 FAM177A1Q8N128 213 aaPredicted RBP10.49□□□□□ -0.73
THBS3-201ENST00000368378 ZBTB3Q9H5J0 574 aa10.49□□□□□ -0.73
THBS3-201ENST00000368378 TUBGCP6Q96RT7 1819 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 ME1P48163 572 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 PIBF1Q8WXW3 757 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 BCL2L12Q9HB09 334 aa10.48□□□□□ -0.73
THBS3-201ENST00000368378 A0A087WZG4 1122 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms