RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 CALML4Q96GE6 196 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 TBC1D2Q9BYX2 928 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 PARP3Q9Y6F1 533 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 CCT2P78371 535 aaKnown RBP15.59■□□□□ 0.09
LDB3-202ENST00000361373 KIF2AO00139 706 aaPredicted RBP15.59■□□□□ 0.09
LDB3-202ENST00000361373 IL13P35225 146 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 PCDHB15Q9Y5E8 787 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 ARHGEF5Q12774 1597 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 POLD1P28340 1107 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 STXBP4Q6ZWJ1 553 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 CCDC148Q8NFR7 591 aa15.59■□□□□ 0.09
LDB3-202ENST00000361373 JARID2Q92833 1246 aaPredicted RBP15.59■□□□□ 0.09
LDB3-202ENST00000361373 ZNF790Q6PG37 636 aa15.58■□□□□ 0.09
LDB3-202ENST00000361373 MICU3Q86XE3 530 aa15.58■□□□□ 0.09
LDB3-202ENST00000361373 ESYT1Q9BSJ8 1104 aa15.58■□□□□ 0.09
LDB3-202ENST00000361373 TFCP2L1Q9NZI6 479 aa15.58■□□□□ 0.09
LDB3-202ENST00000361373 GJB2P29033 226 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 CNNM3Q8NE01 707 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 HAND2P61296 217 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 SLC9C2Q5TAH2 1124 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 VPS36Q86VN1 386 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 SLC4A4Q9Y6R1 1079 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 RAD50Q92878 1312 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 ZBTB43O43298 467 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 CETN2P41208 172 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 PLBD2Q8NHP8 589 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 PAG1Q9NWQ8 432 aa15.58■□□□□ 0.08
LDB3-202ENST00000361373 CCDC112Q8NEF3 446 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 RBM25P49756 843 aaKnown RBP15.57■□□□□ 0.08
LDB3-202ENST00000361373 CEP85Q6P2H3 762 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 INSRP06213 1382 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 ZNF771Q7L3S4 317 aaPredicted RBP15.57■□□□□ 0.08
LDB3-202ENST00000361373 FILIP1Q7Z7B0 1213 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 TSPY3P0CV98 308 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 TSPY8P0CW00 308 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 CALM1P0DP23 149 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 CALM2P0DP24 149 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 CALM3P0DP25 149 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 UBA7P41226 1012 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 STX8Q9UNK0 236 aa15.57■□□□□ 0.08
LDB3-202ENST00000361373 ERLIN1O75477 346 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 GUCY1B3Q02153 619 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 TRAPPC3LQ5T215 181 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 SFPQP23246 707 aaKnown RBP eCLIP15.56■□□□□ 0.08
LDB3-202ENST00000361373 ORAI2Q96SN7 254 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 RBM8AQ9Y5S9 174 aaKnown RBP15.56■□□□□ 0.08
LDB3-202ENST00000361373 SYCE3A1L190 88 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 FSIP1Q8NA03 581 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 SLAIN2Q9P270 581 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 KLF18A0A0U1RQI7 1052 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 CETN1Q12798 172 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 ARHGAP29Q52LW3 1261 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 WDR78Q5VTH9 848 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 CCDC191Q8NCU4 936 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 ZBTB40Q9NUA8 1239 aa15.56■□□□□ 0.08
LDB3-202ENST00000361373 TAF4BQ92750 862 aa15.55■□□□□ 0.08
LDB3-202ENST00000361373 BRF1Q92994 677 aa15.55■□□□□ 0.08
LDB3-202ENST00000361373 MAGI2Q86UL8 1455 aa15.55■□□□□ 0.08
LDB3-202ENST00000361373 TSPYL6Q8N831 410 aa15.55■□□□□ 0.08
LDB3-202ENST00000361373 SLC26A6Q9BXS9 759 aa15.55■□□□□ 0.08
LDB3-202ENST00000361373 RNF113AO15541 343 aaKnown RBP15.55■□□□□ 0.08
LDB3-202ENST00000361373 IFIT1BQ5T764 474 aaKnown RBP15.55■□□□□ 0.08
LDB3-202ENST00000361373 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
LDB3-202ENST00000361373 SEPT11Q9NVA2 429 aaKnown RBP15.55■□□□□ 0.08
LDB3-202ENST00000361373 CHL1O00533 1208 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 SH3TC1Q8TE82 1336 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 SBNO2Q9Y2G9 1366 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 MAGEB6P1A0A0J9YX57 407 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 KIAA1328Q86T90 577 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 SMC5Q8IY18 1101 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 ZSCAN12O43309 604 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 SPA17Q15506 151 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 ERMNQ8TAM6 284 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 CAMK4Q16566 473 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 RTN1Q16799 776 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 TSHZ3Q63HK5 1081 aa15.54■□□□□ 0.08
LDB3-202ENST00000361373 METTL22Q9BUU2 404 aaPredicted RBP15.54■□□□□ 0.08
LDB3-202ENST00000361373 JAKMIP3Q5VZ66 844 aa15.53■□□□□ 0.08
LDB3-202ENST00000361373 GOLGA6L10A6NI86 522 aa15.53■□□□□ 0.08
LDB3-202ENST00000361373 CWF19L2Q2TBE0 894 aaKnown RBP15.53■□□□□ 0.08
LDB3-202ENST00000361373 CCDC102BQ68D86 513 aa15.53■□□□□ 0.08
LDB3-202ENST00000361373 JDP2Q8WYK2 163 aa15.53■□□□□ 0.08
LDB3-202ENST00000361373 PLXNC1O60486 1568 aa15.53■□□□□ 0.08
LDB3-202ENST00000361373 TNPO1Q92973 898 aaKnown RBP15.53■□□□□ 0.08
LDB3-202ENST00000361373 RBM17Q96I25 401 aaKnown RBP15.53■□□□□ 0.08
LDB3-202ENST00000361373 SLC52A2Q9HAB3 445 aa15.53■□□□□ 0.08
LDB3-202ENST00000361373 NSFL1CQ9UNZ2 370 aaKnown RBP15.53■□□□□ 0.08
LDB3-202ENST00000361373 SSFA2P28290 1259 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 UBE2HP62256 183 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 CACNA2D4Q7Z3S7 1137 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 FAM114A1Q8IWE2 563 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 TARBP1Q13395 1621 aaKnown RBP15.52■□□□□ 0.08
LDB3-202ENST00000361373 NEMFO60524 1076 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 CERS3Q8IU89 383 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 VAT1LQ9HCJ6 419 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 DENND2AQ9ULE3 1009 aa15.52■□□□□ 0.08
LDB3-202ENST00000361373 RTL9Q8NET4 1388 aa15.52■□□□□ 0.07
LDB3-202ENST00000361373 KLHL10Q6JEL2 608 aa15.52■□□□□ 0.07
LDB3-202ENST00000361373 TMX3Q96JJ7 454 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms