RNA–Protein interactions for RNA: ENST00000359726.7

APP-206, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 3,294 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-206ENST00000359726 IMPACTQ9P2X3 320 aa8.84□□□□□ -0.99
APP-206ENST00000359726 LRRFIP2Q9Y608 721 aaKnown RBP8.84□□□□□ -0.99
APP-206ENST00000359726 MAP3K5Q99683 1374 aa8.84□□□□□ -0.99
APP-206ENST00000359726 DIP2AQ14689 1571 aa8.83□□□□□ -1
APP-206ENST00000359726 MLH3Q9UHC1 1453 aa8.83□□□□□ -1
APP-206ENST00000359726 SEC31AO94979 1220 aaKnown RBP8.83□□□□□ -1
APP-206ENST00000359726 CCT4P50991 539 aaKnown RBP8.83□□□□□ -1
APP-206ENST00000359726 PTH1RQ03431 593 aa8.83□□□□□ -1
APP-206ENST00000359726 RESTQ13127 1097 aa8.83□□□□□ -1
APP-206ENST00000359726 NBPF6Q5VWK0 638 aa8.83□□□□□ -1
APP-206ENST00000359726 SSH3Q8TE77 659 aa8.83□□□□□ -1
APP-206ENST00000359726 NBPF4Q96M43 638 aa8.83□□□□□ -1
APP-206ENST00000359726 HSD3B7Q9H2F3 369 aa8.83□□□□□ -1
APP-206ENST00000359726 ECM29Q5VYK3 1845 aa8.83□□□□□ -1
APP-206ENST00000359726 OAS2P29728 719 aaKnown RBP8.83□□□□□ -1
APP-206ENST00000359726 RRP15Q9Y3B9 282 aaKnown RBP8.83□□□□□ -1
APP-206ENST00000359726 GNAI2P04899 355 aa8.83□□□□□ -1
APP-206ENST00000359726 SCAND2PQ9GZW5 306 aaPredicted RBP8.83□□□□□ -1
APP-206ENST00000359726 GOLPH3LQ9H4A5 285 aa8.83□□□□□ -1
APP-206ENST00000359726 TRMT1Q9NXH9 659 aaKnown RBP8.83□□□□□ -1
APP-206ENST00000359726 MRC1P22897 1456 aa8.82□□□□□ -1
APP-206ENST00000359726 TTC41PQ6P2S7 1318 aa8.82□□□□□ -1
APP-206ENST00000359726 EFCAB8A8MWE9 144 aa8.82□□□□□ -1
APP-206ENST00000359726 CASTP20810 708 aaKnown RBP8.82□□□□□ -1
APP-206ENST00000359726 TMEM139Q8IV31 216 aa8.82□□□□□ -1
APP-206ENST00000359726 RILPL2Q969X0 211 aa8.82□□□□□ -1
APP-206ENST00000359726 NCAPGQ9BPX3 1015 aa8.82□□□□□ -1
APP-206ENST00000359726 TPM4P67936 248 aa8.82□□□□□ -1
APP-206ENST00000359726 SUGP1Q8IWZ8 645 aaKnown RBP8.82□□□□□ -1
APP-206ENST00000359726 BPIFA3Q9BQP9 254 aa8.82□□□□□ -1
APP-206ENST00000359726 LOC102724159A0A0B4J2E5 919 aa8.81□□□□□ -1
APP-206ENST00000359726 F6X3S4 739 aa8.81□□□□□ -1
APP-206ENST00000359726 TOB2Q14106 344 aaPredicted RBP8.81□□□□□ -1
APP-206ENST00000359726 PWP2Q15269 919 aaKnown RBP8.81□□□□□ -1
APP-206ENST00000359726 SWT1Q5T5J6 900 aaKnown RBP8.81□□□□□ -1
APP-206ENST00000359726 FILIP1Q7Z7B0 1213 aa8.81□□□□□ -1
APP-206ENST00000359726 DRC7Q8IY82 874 aa8.81□□□□□ -1
APP-206ENST00000359726 CCDC191Q8NCU4 936 aa8.81□□□□□ -1
APP-206ENST00000359726 ZSCAN16Q9H4T2 348 aaPredicted RBP8.81□□□□□ -1
APP-206ENST00000359726 ADAM21Q9UKJ8 722 aa8.81□□□□□ -1
APP-206ENST00000359726 SMC1AQ14683 1233 aaKnown RBP8.81□□□□□ -1
APP-206ENST00000359726 ILDR1Q86SU0 546 aaPredicted RBP8.81□□□□□ -1
APP-206ENST00000359726 ACTN2P35609 894 aa8.81□□□□□ -1
APP-206ENST00000359726 GSDMDP57764 484 aa8.81□□□□□ -1
APP-206ENST00000359726 ETF1P62495 437 aaKnown RBP8.81□□□□□ -1
APP-206ENST00000359726 C10orf67Q8IYJ2 551 aa8.81□□□□□ -1
APP-206ENST00000359726 KIFC2Q96AC6 838 aa8.81□□□□□ -1
APP-206ENST00000359726 PDRG1Q9NUG6 133 aa8.81□□□□□ -1
APP-206ENST00000359726 ATP2B1P20020 1258 aa8.8□□□□□ -1
APP-206ENST00000359726 MAGEA9P43362 315 aa8.8□□□□□ -1
APP-206ENST00000359726 NCAPHQ15003 741 aa8.8□□□□□ -1
APP-206ENST00000359726 STX1AQ16623 288 aa8.8□□□□□ -1
APP-206ENST00000359726 FOXR1Q6PIV2 292 aa8.8□□□□□ -1
APP-206ENST00000359726 NECAB1Q8N987 351 aa8.8□□□□□ -1
APP-206ENST00000359726 USP54Q70EL1 1684 aa8.8□□□□□ -1
APP-206ENST00000359726 NWD1Q149M9 1564 aa8.8□□□□□ -1
APP-206ENST00000359726 SLC4A2P04920 1241 aa8.8□□□□□ -1
APP-206ENST00000359726 MAP3K9P80192 1104 aa8.8□□□□□ -1
APP-206ENST00000359726 TPRNQ4KMQ1 711 aa8.8□□□□□ -1
APP-206ENST00000359726 LARP1Q6PKG0 1096 aaKnown RBP8.8□□□□□ -1
APP-206ENST00000359726 CABP1Q9NZU7 370 aa8.8□□□□□ -1
APP-206ENST00000359726 C4AP0C0L4 1744 aa8.8□□□□□ -1
APP-206ENST00000359726 C4BP0C0L5 1744 aa8.8□□□□□ -1
APP-206ENST00000359726 DIP2CQ9Y2E4 1556 aa8.8□□□□□ -1
APP-206ENST00000359726 TMCO3Q6UWJ1 677 aa8.79□□□□□ -1
APP-206ENST00000359726 SPATA32Q96LK8 384 aa8.79□□□□□ -1
APP-206ENST00000359726 USP44Q9H0E7 712 aa8.79□□□□□ -1
APP-206ENST00000359726 EPC1Q9H2F5 836 aa8.79□□□□□ -1
APP-206ENST00000359726 DNAI1Q9UI46 699 aa8.79□□□□□ -1
APP-206ENST00000359726 VWA3AA6NCI4 1184 aa8.79□□□□□ -1
APP-206ENST00000359726 POLR3GO15318 223 aaPredicted RBP8.79□□□□□ -1
APP-206ENST00000359726 HTATSF1O43719 755 aaKnown RBP8.79□□□□□ -1
APP-206ENST00000359726 PSME1Q06323 249 aa8.79□□□□□ -1
APP-206ENST00000359726 TEX35Q5T0J7 233 aa8.79□□□□□ -1
APP-206ENST00000359726 LARP1BQ659C4 914 aaKnown RBP8.79□□□□□ -1
APP-206ENST00000359726 SYTL4Q96C24 671 aaPredicted RBP8.79□□□□□ -1
APP-206ENST00000359726 SLC26A8Q96RN1 970 aa8.79□□□□□ -1
APP-206ENST00000359726 SRRTQ9BXP5 876 aaKnown RBP8.79□□□□□ -1
APP-206ENST00000359726 SPG7Q9UQ90 795 aa8.79□□□□□ -1
APP-206ENST00000359726 TAF6LQ9Y6J9 622 aa8.79□□□□□ -1
APP-206ENST00000359726 VPS37CA5D8V6 355 aaPredicted RBP8.79□□□□□ -1
APP-206ENST00000359726 PRR29P0C7W0 189 aa8.79□□□□□ -1
APP-206ENST00000359726 USP5P45974 858 aa8.79□□□□□ -1
APP-206ENST00000359726 CORO7P57737 925 aa8.79□□□□□ -1
APP-206ENST00000359726 IDI1Q13907 227 aa8.79□□□□□ -1
APP-206ENST00000359726 LRRFIP1Q32MZ4 808 aaKnown RBP8.79□□□□□ -1
APP-206ENST00000359726 CT47A1Q5JQC4 288 aaPredicted RBP8.79□□□□□ -1
APP-206ENST00000359726 HNRNPLLQ8WVV9 542 aaKnown RBP8.79□□□□□ -1
APP-206ENST00000359726 CDK19Q9BWU1 502 aa8.79□□□□□ -1
APP-206ENST00000359726 RCOR1Q9UKL0 485 aa8.79□□□□□ -1
APP-206ENST00000359726 PPP6R1Q9UPN7 881 aa8.79□□□□□ -1
APP-206ENST00000359726 MED23Q9ULK4 1368 aa8.79□□□□□ -1
APP-206ENST00000359726 OVOS2A0A0J9YW53 1432 aa8.78□□□□□ -1
APP-206ENST00000359726 OVOS2Q6IE36 1432 aa8.78□□□□□ -1
APP-206ENST00000359726 GTF2A1P52655 376 aaPredicted RBP8.78□□□□□ -1
APP-206ENST00000359726 HAP1P54257 671 aaPredicted RBP8.78□□□□□ -1
APP-206ENST00000359726 FERMT3Q86UX7 667 aa8.78□□□□□ -1
APP-206ENST00000359726 MAP4K1Q92918 833 aa8.78□□□□□ -1
APP-206ENST00000359726 JRKLQ9Y4A0 524 aa8.78□□□□□ -1
APP-206ENST00000359726 MRFAP1Q9Y605 127 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms