RNA–Protein interactions for RNA: ENST00000356090.8

NCDN-201, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,433 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-201ENST00000356090 ARID5BQ14865 1188 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 TM6SF1Q9BZW5 370 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 RICTORQ6R327 1708 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 SF3A1Q15459 793 aaKnown RBP15.74■□□□□ 0.11
NCDN-201ENST00000356090 MAP4K1Q92918 833 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
NCDN-201ENST00000356090 NEK1Q96PY6 1258 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 SDF4Q9BRK5 362 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 PRDM4Q9UKN5 801 aa15.74■□□□□ 0.11
NCDN-201ENST00000356090 ZNF75DP51815 510 aa15.73■□□□□ 0.11
NCDN-201ENST00000356090 KINO60870 393 aaKnown RBP15.73■□□□□ 0.11
NCDN-201ENST00000356090 RAB11FIP4Q86YS3 637 aa15.73■□□□□ 0.11
NCDN-201ENST00000356090 USP16Q9Y5T5 823 aa15.73■□□□□ 0.11
NCDN-201ENST00000356090 ATP5J2-PTCD1G3V325 749 aa15.72■□□□□ 0.11
NCDN-201ENST00000356090 PTCD1O75127 700 aaKnown RBP15.72■□□□□ 0.11
NCDN-201ENST00000356090 ZSCAN25Q6NSZ9 544 aa15.72■□□□□ 0.11
NCDN-201ENST00000356090 ZNF330Q9Y3S2 320 aaPredicted RBP15.72■□□□□ 0.11
NCDN-201ENST00000356090 SLFNL1Q499Z3 407 aa15.72■□□□□ 0.11
NCDN-201ENST00000356090 CCAR1Q8IX12 1150 aaKnown RBP15.72■□□□□ 0.11
NCDN-201ENST00000356090 CACTINQ8WUQ7 758 aaKnown RBP15.72■□□□□ 0.11
NCDN-201ENST00000356090 PHF8Q9UPP1 1060 aa15.72■□□□□ 0.11
NCDN-201ENST00000356090 ADCY9O60503 1353 aa15.72■□□□□ 0.11
NCDN-201ENST00000356090 PEAK1Q9H792 1746 aa15.71■□□□□ 0.11
NCDN-201ENST00000356090 CLSTN2Q9H4D0 955 aa15.71■□□□□ 0.11
NCDN-201ENST00000356090 NCOA5Q9HCD5 579 aaKnown RBP15.71■□□□□ 0.11
NCDN-201ENST00000356090 UBE3BQ7Z3V4 1068 aa15.71■□□□□ 0.11
NCDN-201ENST00000356090 RIMBP3CA6NJZ7 1639 aa15.71■□□□□ 0.11
NCDN-201ENST00000356090 RIMBP3BA6NNM3 1639 aa15.71■□□□□ 0.11
NCDN-201ENST00000356090 RIMBP3Q9UFD9 1639 aa15.71■□□□□ 0.11
NCDN-201ENST00000356090 TOB2Q14106 344 aaPredicted RBP15.71■□□□□ 0.1
NCDN-201ENST00000356090 LINS1Q8NG48 757 aa15.71■□□□□ 0.1
NCDN-201ENST00000356090 PGBD1Q96JS3 809 aa15.71■□□□□ 0.1
NCDN-201ENST00000356090 BIN1O00499 593 aa15.7■□□□□ 0.1
NCDN-201ENST00000356090 ALDH1L1O75891 902 aa15.7■□□□□ 0.1
NCDN-201ENST00000356090 ISM2Q6H9L7 571 aa15.7■□□□□ 0.1
NCDN-201ENST00000356090 CFAP45Q9UL16 551 aa15.7■□□□□ 0.1
NCDN-201ENST00000356090 APOBRQ0VD83 1088 aa15.7■□□□□ 0.1
NCDN-201ENST00000356090 C3P01024 1663 aa15.7■□□□□ 0.1
NCDN-201ENST00000356090 SMC2O95347 1197 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 CCDC144BQ3MJ40 725 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 GORABQ5T7V8 394 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 CEP135Q66GS9 1140 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 CCDC144CPQ8IYA2 1237 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 XAGE3Q8WTP9 111 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 GIGYF1O75420 1035 aaPredicted RBP15.69■□□□□ 0.1
NCDN-201ENST00000356090 SKILP12757 684 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 TFCP2Q12800 502 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 PTPN14Q15678 1187 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 NRKQ7Z2Y5 1582 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 RNMTO43148 476 aaKnown RBP15.69■□□□□ 0.1
NCDN-201ENST00000356090 ZSCAN20P17040 1043 aaPredicted RBP15.69■□□□□ 0.1
NCDN-201ENST00000356090 ZC3H6P61129 1189 aaKnown RBP15.69■□□□□ 0.1
NCDN-201ENST00000356090 AKAP4Q5JQC9 854 aa15.69■□□□□ 0.1
NCDN-201ENST00000356090 C11orf57Q6ZUT1 292 aaPredicted RBP15.69■□□□□ 0.1
NCDN-201ENST00000356090 FSIP1Q8NA03 581 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 NLRP2Q9NX02 1062 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 MON2Q7Z3U7 1717 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 CSB-PGBD3P0DP91 1061 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 IP6K1Q92551 441 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 DBNDD2Q9BQY9 259 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 ADAMTS13Q76LX8 1427 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 GOLIM4O00461 696 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 DMTNQ08495 405 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 OTUD7BQ6GQQ9 843 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 AOPEPQ8N6M6 819 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 BABAM1Q9NWV8 329 aa15.68■□□□□ 0.1
NCDN-201ENST00000356090 POLR3DP05423 398 aaPredicted RBP15.67■□□□□ 0.1
NCDN-201ENST00000356090 GTF2F1P35269 517 aaKnown RBP eCLIP15.67■□□□□ 0.17e-7■■■□□ 17.8
NCDN-201ENST00000356090 TAF5LO75529 589 aa15.67■□□□□ 0.1
NCDN-201ENST00000356090 KRT32Q14532 448 aa15.67■□□□□ 0.1
NCDN-201ENST00000356090 EPHA10Q5JZY3 1008 aa15.67■□□□□ 0.1
NCDN-201ENST00000356090 USP27XA6NNY8 438 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 NCBP1Q09161 790 aaKnown RBP15.66■□□□□ 0.1
NCDN-201ENST00000356090 SMTNL1A8MU46 457 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 HAND2P61296 217 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 GTF3C6Q969F1 213 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 TECPR2O15040 1411 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 CCDC69A6NI79 296 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 HOMER1Q86YM7 354 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 CCDC85AQ96PX6 553 aaPredicted RBP15.66■□□□□ 0.1
NCDN-201ENST00000356090 HMG20BQ9P0W2 317 aa15.66■□□□□ 0.1
NCDN-201ENST00000356090 PTPRUQ92729 1446 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 PTPDC1A2A3K4 754 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 IL17RAQ96F46 866 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 DBNLQ9UJU6 430 aaKnown RBP15.65■□□□□ 0.1
NCDN-201ENST00000356090 ELP1O95163 1332 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 A0A1B0GVL5 298 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 CYP21A2P08686 494 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 STX1AQ16623 288 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 USP28Q96RU2 1077 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 A0A087WZG4 1122 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 SCRN1Q12765 414 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 CEP57L1Q8IYX8 460 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 TTC5Q8N0Z6 440 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 ANKRD24Q8TF21 1146 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 KAZALD1Q96I82 304 aa15.65■□□□□ 0.1
NCDN-201ENST00000356090 HOXB7P09629 217 aa15.64■□□□□ 0.09
NCDN-201ENST00000356090 STK38Q15208 465 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms