RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 AATKQ6ZMQ8 1374 aa16.42■□□□□ 0.22
SREBF1-202ENST00000355815 KIAA0232Q92628 1395 aa16.42■□□□□ 0.22
SREBF1-202ENST00000355815 NEK1Q96PY6 1258 aa16.42■□□□□ 0.22
SREBF1-202ENST00000355815 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
SREBF1-202ENST00000355815 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
SREBF1-202ENST00000355815 QRICH2Q9H0J4 1663 aa16.42■□□□□ 0.22
SREBF1-202ENST00000355815 LMAN1P49257 510 aa16.42■□□□□ 0.22
SREBF1-202ENST00000355815 ANAPC15P60006 121 aa16.42■□□□□ 0.22
SREBF1-202ENST00000355815 SEC62Q99442 399 aaKnown RBP16.42■□□□□ 0.22
SREBF1-202ENST00000355815 A2ML1A8K2U0 1454 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-202ENST00000355815 ADCK5Q3MIX3 580 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 GPT2Q8TD30 523 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 DDX21Q9NR30 783 aaKnown RBP eCLIP16.41■□□□□ 0.22
SREBF1-202ENST00000355815 HELBQ8NG08 1087 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-202ENST00000355815 TRIM34Q9BYJ4 488 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 TLR7Q9NYK1 1049 aaKnown RBP16.41■□□□□ 0.22
SREBF1-202ENST00000355815 IQSEC3Q9UPP2 1182 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-202ENST00000355815 BIN1O00499 593 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 ALDH1L1O75891 902 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 BEND3Q5T5X7 828 aa16.41■□□□□ 0.22
SREBF1-202ENST00000355815 F13A1P00488 732 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 SFPQP23246 707 aaKnown RBP eCLIP16.4■□□□□ 0.22
SREBF1-202ENST00000355815 CFAP100Q494V2 611 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 ABCF2Q9UG63 623 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 USP6P35125 1406 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 IGSF1Q8N6C5 1336 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 ADAMTS2O95450 1211 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 CEP57L1Q8IYX8 460 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 NUP133Q8WUM0 1156 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 SH2B1Q9NRF2 756 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-202ENST00000355815 ANKRD20A12PQ8NF67 263 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 DACT1Q9NYF0 836 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 LRRC7Q96NW7 1537 aa16.4■□□□□ 0.22
SREBF1-202ENST00000355815 Q6ZUG5 572 aa16.39■□□□□ 0.22
SREBF1-202ENST00000355815 SMAP1Q8IYB5 467 aaPredicted RBP16.39■□□□□ 0.22
SREBF1-202ENST00000355815 KRT222Q8N1A0 295 aa16.39■□□□□ 0.22
SREBF1-202ENST00000355815 TMOD3Q9NYL9 352 aa16.39■□□□□ 0.22
SREBF1-202ENST00000355815 ZNF165P49910 485 aa16.39■□□□□ 0.21
SREBF1-202ENST00000355815 CLASP1Q7Z460 1538 aa16.39■□□□□ 0.21
SREBF1-202ENST00000355815 UBE2HP62256 183 aa16.39■□□□□ 0.21
SREBF1-202ENST00000355815 LDHAL6AQ6ZMR3 332 aa16.39■□□□□ 0.21
SREBF1-202ENST00000355815 ALKQ9UM73 1620 aa16.39■□□□□ 0.21
SREBF1-202ENST00000355815 MPHOSPH8Q99549 860 aa16.38■□□□□ 0.21
SREBF1-202ENST00000355815 TBC1D2BQ9UPU7 963 aa16.38■□□□□ 0.21
SREBF1-202ENST00000355815 KIDINS220Q9ULH0 1771 aa16.38■□□□□ 0.21
SREBF1-202ENST00000355815 FAM89AQ96GI7 184 aa16.38■□□□□ 0.21
SREBF1-202ENST00000355815 SRRTQ9BXP5 876 aaKnown RBP16.38■□□□□ 0.21
SREBF1-202ENST00000355815 CWC25Q9NXE8 425 aaPredicted RBP16.38■□□□□ 0.21
SREBF1-202ENST00000355815 TRMT112Q9UI30 125 aaKnown RBP16.38■□□□□ 0.21
SREBF1-202ENST00000355815 CCDC171Q6TFL3 1326 aa16.38■□□□□ 0.21
SREBF1-202ENST00000355815 IFIT5Q13325 482 aaKnown RBP16.37■□□□□ 0.21
SREBF1-202ENST00000355815 KRT32Q14532 448 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 ARAP3Q8WWN8 1544 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 CEP135Q66GS9 1140 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 NCOA5Q9HCD5 579 aaKnown RBP16.37■□□□□ 0.21
SREBF1-202ENST00000355815 IQGAP1P46940 1657 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 PTPRMP28827 1452 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 ATP7BP35670 1465 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 RAD21O60216 631 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 HSPA4P34932 840 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 APOBRQ0VD83 1088 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 ABCA9Q8IUA7 1624 aa16.37■□□□□ 0.21
SREBF1-202ENST00000355815 A0A0D9SFI3 127 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 RXRAP19793 462 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 SIRT1Q96EB6 747 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 RNF216Q9NWF9 866 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-202ENST00000355815 FSD2A1L4K1 749 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 MARCH6O60337 910 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 PTGS1P23219 599 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 SLC4A8Q2Y0W8 1093 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 NOL7Q9UMY1 257 aaKnown RBP16.36■□□□□ 0.21
SREBF1-202ENST00000355815 ARHGAP31Q2M1Z3 1444 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 GTF3C6Q969F1 213 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 U3KPZ7 1027 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-202ENST00000355815 JAK2O60674 1132 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 SLFNL1Q499Z3 407 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 C10orf67Q8IYJ2 551 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 ERCC4Q92889 916 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-202ENST00000355815 HOOK1Q9UJC3 728 aaKnown RBP16.36■□□□□ 0.21
SREBF1-202ENST00000355815 AXIN2Q9Y2T1 843 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 RAD50Q92878 1312 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 ARHGEF10O15013 1369 aa16.36■□□□□ 0.21
SREBF1-202ENST00000355815 IBTKQ9P2D0 1353 aaPredicted RBP16.36■□□□□ 0.21
SREBF1-202ENST00000355815 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
SREBF1-202ENST00000355815 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
SREBF1-202ENST00000355815 C19orf44Q9H6X5 657 aa16.35■□□□□ 0.21
SREBF1-202ENST00000355815 ADGRB1O14514 1584 aa16.35■□□□□ 0.21
SREBF1-202ENST00000355815 BRD1O95696 1058 aa16.35■□□□□ 0.21
SREBF1-202ENST00000355815 RUFY3Q7L099 469 aa16.35■□□□□ 0.21
SREBF1-202ENST00000355815 GTPBP4Q9BZE4 634 aaKnown RBP16.35■□□□□ 0.21
SREBF1-202ENST00000355815 LAMC1P11047 1609 aa16.35■□□□□ 0.21
SREBF1-202ENST00000355815 KIAA0754O94854 1291 aa16.35■□□□□ 0.21
SREBF1-202ENST00000355815 INO80Q9ULG1 1556 aaPredicted RBP16.35■□□□□ 0.21
SREBF1-202ENST00000355815 ERICH2A1L162 156 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 ME3Q16798 604 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 HSP90AA4PQ58FG1 418 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 KLHL34Q8N239 644 aa16.34■□□□□ 0.21
SREBF1-202ENST00000355815 SCAND2PQ9GZW5 306 aaPredicted RBP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms