RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 EXOC1Q9NV70 894 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 ZBTB43O43298 467 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 ADCY5O95622 1261 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 NIP7Q9Y221 180 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCN8A-202ENST00000355133 AFMP43652 599 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 HLTFQ14527 1009 aaKnown RBP eCLIP15.17■□□□□ 0.02
SCN8A-202ENST00000355133 HEATR3Q7Z4Q2 680 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 TRIM47Q96LD4 638 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 WWC3Q9ULE0 1092 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 TTC21AQ8NDW8 1320 aa15.17■□□□□ 0.02
SCN8A-202ENST00000355133 SHTN1A0MZ66 631 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 ZNF165P49910 485 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 UBE4AQ14139 1066 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 GOLGA6L10A0A0M3HER8 536 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 KANK3Q6NY19 840 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 C8orf37Q96NL8 207 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 NLRP3Q96P20 1036 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 ALG1Q9BT22 464 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 NUCB1Q02818 461 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 CABLES1Q8TDN4 633 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 DRC1Q96MC2 740 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 MCM3P25205 808 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 GSDMDP57764 484 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 RRAGBQ5VZM2 374 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 NAA16Q6N069 864 aaPredicted RBP15.16■□□□□ 0.02
SCN8A-202ENST00000355133 TMX3Q96JJ7 454 aa15.16■□□□□ 0.02
SCN8A-202ENST00000355133 PYM1Q9BRP8 204 aaKnown RBP15.16■□□□□ 0.02
SCN8A-202ENST00000355133 ESR2Q92731 530 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 LRRC59Q96AG4 307 aaKnown RBP15.15■□□□□ 0.02
SCN8A-202ENST00000355133 GRM8O00222 908 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 NBPF7P0C2Y1 421 aaPredicted RBP15.15■□□□□ 0.02
SCN8A-202ENST00000355133 RBM8AQ9Y5S9 174 aaKnown RBP15.15■□□□□ 0.02
SCN8A-202ENST00000355133 SYKP43405 635 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 RTN1Q16799 776 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 SPECC1Q5M775 1068 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 PA2G4Q9UQ80 394 aaKnown RBP15.15■□□□□ 0.02
SCN8A-202ENST00000355133 UBE2HP62256 183 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 SLC9C2Q5TAH2 1124 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 CCDC174Q6PII3 467 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 C8orf58Q8NAV2 365 aa15.15■□□□□ 0.02
SCN8A-202ENST00000355133 UBAP1LF5GYI3 381 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 GRM1Q13255 1194 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 PPIP5K1Q6PFW1 1433 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 GCOM1H8Y6P7 765 aaPredicted RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 N4BP3O15049 544 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 ZFYP08048 801 aaPredicted RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 MYZAPP0CAP1 466 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 HSP90AA4PQ58FG1 418 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 GIMAP6Q6P9H5 292 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 LRRC27Q9C0I9 530 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 RBM25P49756 843 aaKnown RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 UTP14AQ9BVJ6 771 aaKnown RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 HDAC9Q9UKV0 1011 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 MCMDC2Q4G0Z9 681 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 AKAP4Q5JQC9 854 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 ZSCAN16Q9H4T2 348 aaPredicted RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 COMMD10Q9Y6G5 202 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 POLR3GO15318 223 aaPredicted RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 ZSCAN22P10073 491 aaPredicted RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 STAT6P42226 847 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 PDE1AP54750 535 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 Q6ZUG5 572 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 ZGPATQ8N5A5 531 aaKnown RBP15.14■□□□□ 0.01
SCN8A-202ENST00000355133 ERMNQ8TAM6 284 aa15.14■□□□□ 0.01
SCN8A-202ENST00000355133 NEMFO60524 1076 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 CBX1P83916 185 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 KSR2Q6VAB6 950 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 PSMD1Q99460 953 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 MPHOSPH6Q99547 160 aaKnown RBP15.13■□□□□ 0.01
SCN8A-202ENST00000355133 JADE2Q9NQC1 790 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 DNAJC5BQ9UF47 199 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 CUL7Q14999 1698 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 SBNO2Q9Y2G9 1366 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 DDB1Q16531 1140 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 SIRT1Q96EB6 747 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 NAA15Q9BXJ9 866 aaKnown RBP15.13■□□□□ 0.01
SCN8A-202ENST00000355133 TAOK3Q9H2K8 898 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 CNNM2Q9H8M5 875 aa15.13■□□□□ 0.01
SCN8A-202ENST00000355133 NPHP3Q7Z494 1330 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 EIF4A2Q14240 407 aaKnown RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 DZIP3Q86Y13 1208 aaKnown RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 CNPY2Q9Y2B0 182 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 IL15P40933 162 aaPredicted RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 C16orf71Q8IYS4 520 aaPredicted RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 OGFOD1Q8N543 542 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 MRPL50Q8N5N7 158 aaKnown RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 ARHGAP45Q92619 1136 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 TBC1D32Q96NH3 1257 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 ZSWIM4Q9H7M6 989 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 NAPAP54920 295 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 SNW1Q13573 536 aaKnown RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 ZNF804AQ7Z570 1209 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 RMND1Q9NWS8 449 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 MARCKSP29966 332 aaPredicted RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 HELBQ8NG08 1087 aaPredicted RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 VEZTQ9HBM0 779 aa15.12■□□□□ 0.01
SCN8A-202ENST00000355133 RPRD2Q5VT52 1461 aaKnown RBP15.12■□□□□ 0.01
SCN8A-202ENST00000355133 MAGEB6P1A0A0J9YX57 407 aa15.11■□□□□ 0.01
SCN8A-202ENST00000355133 ALDH1L1O75891 902 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms