RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 APLFQ8IW19 511 aaPredicted RBP9.13□□□□□ -0.95
HTT-201ENST00000355072 PARP2Q9UGN5 583 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 SSH2Q76I76 1423 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 KIF5AQ12840 1032 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 HVCN1Q96D96 273 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 PABPN1LA6NDY0 278 aaKnown RBP9.13□□□□□ -0.95
HTT-201ENST00000355072 RAB3IL1Q8TBN0 382 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 TTF2Q9UNY4 1162 aaKnown RBP9.13□□□□□ -0.95
HTT-201ENST00000355072 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.13□□□□□ -0.95
HTT-201ENST00000355072 ZNF853P0CG23 659 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 EIF2AQ9BY44 585 aaKnown RBP9.13□□□□□ -0.95
HTT-201ENST00000355072 CCDC68Q9H2F9 335 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 CCDC62Q6P9F0 684 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 RUBCNQ92622 972 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 P3H4Q92791 437 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 DRC3Q9H069 523 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 ZSCAN23Q3MJ62 389 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 ERO1AQ96HE7 468 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 CFAP74Q9C0B2 1584 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 TICAM2Q86XR7 235 aa9.13□□□□□ -0.95
HTT-201ENST00000355072 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
HTT-201ENST00000355072 KANK4Q5T7N3 995 aaPredicted RBP9.12□□□□□ -0.95
HTT-201ENST00000355072 CIB2O75838 187 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 APOBRQ0VD83 1088 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 EFCC1Q9HA90 598 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 HDAC1Q13547 482 aaPredicted RBP9.12□□□□□ -0.95
HTT-201ENST00000355072 AFAP1L1Q8TED9 768 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 ZFYVE9O95405 1425 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 GRIN2BQ13224 1484 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 LRCH2Q5VUJ6 765 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 TTC21BQ7Z4L5 1316 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 CCDC102BQ68D86 513 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 RPAINQ86UA6 219 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 SLF2Q8IX21 1173 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 MSH6P52701 1360 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 BRPF1P55201 1214 aaPredicted RBP9.12□□□□□ -0.95
HTT-201ENST00000355072 LAMC3Q9Y6N6 1575 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 TCP11L1Q9NUJ3 509 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 CCDC26Q8TAB7 109 aa9.12□□□□□ -0.95
HTT-201ENST00000355072 GOLGA5Q8TBA6 731 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 PPP1R12CQ9BZL4 782 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 SOGA3Q5TF21 947 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 TSC1Q92574 1164 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 PLIN1O60240 522 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 PPFIA4O75335 1185 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 KIF6Q6ZMV9 814 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 LMNB1P20700 586 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 VWA3BQ502W6 1294 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 CPLX4Q7Z7G2 160 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 URI1O94763 535 aaPredicted RBP9.11□□□□□ -0.95
HTT-201ENST00000355072 PPP2R5BQ15173 497 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
HTT-201ENST00000355072 PHLDB3Q6NSJ2 640 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 MAATS1Q7Z4T9 603 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 HYPKQ9NX55 129 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 NEDD9Q14511 834 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 NAA25Q14CX7 972 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 FCHSD1Q86WN1 690 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 CEP57Q86XR8 500 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 EFCAB13Q8IY85 973 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 CEP120Q8N960 986 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 CNKSR2Q8WXI2 1034 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 TNPO1Q92973 898 aaKnown RBP9.11□□□□□ -0.95
HTT-201ENST00000355072 CALR3Q96L12 384 aaKnown RBP9.11□□□□□ -0.95
HTT-201ENST00000355072 CNNM2Q9H8M5 875 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 ABCA5Q8WWZ7 1642 aa9.11□□□□□ -0.95
HTT-201ENST00000355072 ATP2A3Q93084 1043 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 GFAPP14136 432 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 NMIQ13287 307 aaPredicted RBP9.1□□□□□ -0.95
HTT-201ENST00000355072 IFT20Q8IY31 132 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 SMARCC2Q8TAQ2 1214 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 SMC5Q8IY18 1101 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 PANK1Q8TE04 598 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 SSX2IPQ9Y2D8 614 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 ZNF131P52739 623 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 RNF10Q8N5U6 811 aaKnown RBP9.1□□□□□ -0.95
HTT-201ENST00000355072 IPO4Q8TEX9 1081 aaKnown RBP9.1□□□□□ -0.95
HTT-201ENST00000355072 HOMER2Q9NSB8 354 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 SRGAP3O43295 1099 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 BRD3Q15059 726 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 HAUS8Q9BT25 410 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 FOXD4L6Q3SYB3 417 aaPredicted RBP9.1□□□□□ -0.95
HTT-201ENST00000355072 FOXD4L3Q6VB84 417 aaPredicted RBP9.1□□□□□ -0.95
HTT-201ENST00000355072 SYCE1Q8N0S2 351 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 MRGBPQ9NV56 204 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 SCAF11Q99590 1463 aaKnown RBP9.1□□□□□ -0.95
HTT-201ENST00000355072 PAK3O75914 559 aaPredicted RBP9.1□□□□□ -0.95
HTT-201ENST00000355072 DTNBP1Q96EV8 351 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 C8orf76Q96K31 380 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 PDZRN3Q9UPQ7 1066 aa9.1□□□□□ -0.95
HTT-201ENST00000355072 INPP5BP32019 993 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 CCDC152Q4G0S7 254 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 SRGAP1Q7Z6B7 1085 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 EVI5LQ96CN4 794 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 ZKSCAN8Q15776 578 aaPredicted RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 CCDC96Q2M329 555 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 TSPYL4Q9UJ04 414 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 CTNNA2P26232 953 aa9.09□□□□□ -0.95
HTT-201ENST00000355072 TDRD12Q587J7 1177 aaKnown RBP9.09□□□□□ -0.95
HTT-201ENST00000355072 PPP1R14CQ8TAE6 165 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms