RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 GJB2P29033 226 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 ISM2Q6H9L7 571 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 AEBP2Q6ZN18 517 aaPredicted RBP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 LINS1Q8NG48 757 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 CWC25Q9NXE8 425 aaPredicted RBP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 TRMT1Q9NXH9 659 aaKnown RBP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 ADAMTS13Q76LX8 1427 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 SLIT1O75093 1534 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 PLEKHG3A1L390 1219 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 PROSER3Q2NL68 480 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 TTLL5Q6EMB2 1281 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC129Q6ZRS4 1044 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 HOMER1Q86YM7 354 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC112Q8NEF3 446 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 USP44Q9H0E7 712 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 RBM8AQ9Y5S9 174 aaKnown RBP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 DNM1Q05193 864 aaKnown RBP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC34Q96HJ3 373 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.61□□□□□ -1.19
HMG20A-201ENST00000336216 NPHP3Q7Z494 1330 aa7.61□□□□□ -1.19
HMG20A-201ENST00000336216 CEP170BQ9Y4F5 1589 aaPredicted RBP7.6□□□□□ -1.19
HMG20A-201ENST00000336216 CHMLP26374 656 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 TFCP2Q12800 502 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 PDILTQ8N807 584 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 EVI5LQ96CN4 794 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 BTG4Q9NY30 223 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 MAP3K5Q99683 1374 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 SETD1BQ9UPS6 1966 aaKnown RBP7.6□□□□□ -1.19
HMG20A-201ENST00000336216 DIP2AQ14689 1571 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 PTGS1P23219 599 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 TNNT3P45378 269 aaPredicted RBP7.6□□□□□ -1.19
HMG20A-201ENST00000336216 CCDC186Q7Z3E2 898 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 SMAP1Q8IYB5 467 aaPredicted RBP7.6□□□□□ -1.19
HMG20A-201ENST00000336216 FAM227BQ96M60 508 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 ARHGAP23Q9P227 1491 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 RIOK3O14730 519 aaKnown RBP7.6□□□□□ -1.19
HMG20A-201ENST00000336216 STX6O43752 255 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 TNNT1P13805 278 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 NMIQ13287 307 aaPredicted RBP7.6□□□□□ -1.19
HMG20A-201ENST00000336216 MYRIPQ8NFW9 859 aa7.6□□□□□ -1.19
HMG20A-201ENST00000336216 BBXQ8WY36 941 aaPredicted RBP7.6□□□□□ -1.19
HMG20A-201ENST00000336216 SMC2O95347 1197 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 IGHMBP2P38935 993 aaKnown RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 SART3Q15020 963 aaKnown RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 MICU3Q86XE3 530 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 FAM177A1Q8N128 213 aaPredicted RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 PRIMPOLQ96LW4 560 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 BCL2L12Q9HB09 334 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 ZDHHC9Q9Y397 364 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 BIN1O00499 593 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 RXRAP19793 462 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 IKQ13123 557 aaPredicted RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 IMMTQ16891 758 aaKnown RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 AMOTL1Q8IY63 956 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 NUP62CLQ9H1M0 184 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 SOS1Q07889 1333 aaPredicted RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 ANKRD1Q15327 319 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 UNC5CLQ8IV45 518 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 PCMTD1Q96MG8 357 aaPredicted RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 DBNDD2Q9BQY9 259 aa7.59□□□□□ -1.19
HMG20A-201ENST00000336216 U3KPZ7 1027 aaPredicted RBP7.59□□□□□ -1.19
HMG20A-201ENST00000336216 CPS1P31327 1500 aa7.59□□□□□ -1.2
HMG20A-201ENST00000336216 PTCH1Q13635 1447 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 RANBP6O60518 1105 aaKnown RBP7.58□□□□□ -1.2
HMG20A-201ENST00000336216 AK2P54819 239 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 EIF4A1P60842 406 aaKnown RBP7.58□□□□□ -1.2
HMG20A-201ENST00000336216 LUZP1Q86V48 1076 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 SUCLG2Q96I99 432 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 C8orf37Q96NL8 207 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 DDX21Q9NR30 783 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMG20A-201ENST00000336216 NPHP4O75161 1426 aaPredicted RBP7.58□□□□□ -1.2
HMG20A-201ENST00000336216 NRXN3Q9Y4C0 1643 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 CCDC69A6NI79 296 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 VGLL3A8MV65 326 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 ZNF213O14771 459 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 LETM1O95202 739 aaPredicted RBP7.58□□□□□ -1.2
HMG20A-201ENST00000336216 NAPBQ9H115 298 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 CD163L1Q9NR16 1453 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 ANKRD18BA2A2Z9 1011 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 KCNQ4P56696 695 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 MAP3K11Q16584 847 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 NEK1Q96PY6 1258 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 UBAC1Q9BSL1 405 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 PHF23Q9BUL5 403 aaPredicted RBP7.58□□□□□ -1.2
HMG20A-201ENST00000336216 TRIM34Q9BYJ4 488 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 NACAP1Q9BZK3 213 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 SHPRHQ149N8 1683 aa7.58□□□□□ -1.2
HMG20A-201ENST00000336216 SETD1AO15047 1707 aaKnown RBP7.57□□□□□ -1.2
HMG20A-201ENST00000336216 ZSCAN22P10073 491 aaPredicted RBP7.57□□□□□ -1.2
HMG20A-201ENST00000336216 DDIT3P35638 169 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 ATP6V1AP38606 617 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 HSP90AA4PQ58FG1 418 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 ANKIB1Q9P2G1 1089 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 MED14O60244 1454 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 IL2RBP14784 551 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 SYT1P21579 422 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 TERF1P54274 439 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 UBE2HP62256 183 aa7.57□□□□□ -1.2
HMG20A-201ENST00000336216 ZSCAN31Q96LW9 406 aaPredicted RBP7.57□□□□□ -1.2
HMG20A-201ENST00000336216 USP32Q8NFA0 1604 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms