RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 TMEM132AQ24JP5 1023 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 PRM3Q9NNZ6 103 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 RUFY1Q96T51 708 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 VAT1LQ9HCJ6 419 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 TTC41PQ6P2S7 1318 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 MCM5P33992 734 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 DEF6Q9H4E7 631 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 KLHL40Q2TBA0 621 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 CCDC112Q8NEF3 446 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 ZNF287Q9HBT7 754 aa15.13■□□□□ 0.01
VSTM4-202ENST00000332853 DDX21Q9NR30 783 aaKnown RBP eCLIP15.13■□□□□ 0.01
VSTM4-202ENST00000332853 CYP7A1P22680 504 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 SLC4A4Q9Y6R1 1079 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 PCDH11XQ9BZA7 1347 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 PCDH11YQ9BZA8 1340 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 SYNMO15061 1565 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 UQCRFS1P1P0C7P4 283 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 ANAPC15P60006 121 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 UBE2HP62256 183 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 SKIDA1Q1XH10 827 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 CCDC96Q2M329 555 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 CREB3L3Q68CJ9 461 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 ANKRD18AQ8IVF6 992 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 CNNM3Q8NE01 707 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 TSPY2A6NKD2 308 aa15.12■□□□□ 0.01
VSTM4-202ENST00000332853 IRS4O14654 1257 aaPredicted RBP15.12■□□□□ 0.01
VSTM4-202ENST00000332853 NBPF7P0C2Y1 421 aaPredicted RBP15.12■□□□□ 0.01
VSTM4-202ENST00000332853 KCNQ3O43525 872 aa15.11■□□□□ 0.01
VSTM4-202ENST00000332853 DNM1Q05193 864 aaKnown RBP15.11■□□□□ 0.01
VSTM4-202ENST00000332853 CLIP2Q9UDT6 1046 aa15.11■□□□□ 0.01
VSTM4-202ENST00000332853 DTNBO60941 627 aa15.11■□□□□ 0.01
VSTM4-202ENST00000332853 CCDC129Q6ZRS4 1044 aa15.11■□□□□ 0.01
VSTM4-202ENST00000332853 FAM89AQ96GI7 184 aa15.11■□□□□ 0.01
VSTM4-202ENST00000332853 UTP14AQ9BVJ6 771 aaKnown RBP15.11■□□□□ 0.01
VSTM4-202ENST00000332853 SETDB2Q96T68 719 aa15.11■□□□□ 0.01
VSTM4-202ENST00000332853 UBAP1LF5GYI3 381 aa15.11■□□□□ 0.01
VSTM4-202ENST00000332853 PLEKHF1Q96S99 279 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 SHROOM2Q13796 1616 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 ADCY5O95622 1261 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 HCLS1P14317 486 aaPredicted RBP15.1■□□□□ 0.01
VSTM4-202ENST00000332853 TIMM10P62072 90 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 ZNF594Q96JF6 807 aaPredicted RBP15.1■□□□□ 0.01
VSTM4-202ENST00000332853 NDUFB9Q9Y6M9 179 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 PLEKHG3A1L390 1219 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 A1BGP04217 495 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 ODF2Q5BJF6 829 aa15.1■□□□□ 0.01
VSTM4-202ENST00000332853 APOBRQ0VD83 1088 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 DDX19AQ9NUU7 478 aaKnown RBP15.09■□□□□ 0.01
VSTM4-202ENST00000332853 TMOD2Q9NZR1 351 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 JAG2Q9Y219 1238 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 MIGA1Q8NAN2 632 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 ARHGEF10O15013 1369 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 SUCLG2Q96I99 432 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 SLC52A2Q9HAB3 445 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 PLA2R1Q13018 1463 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 SBNO2Q9Y2G9 1366 aa15.09■□□□□ 0.01
VSTM4-202ENST00000332853 BMP2KQ9NSY1 1161 aaPredicted RBP15.09■□□□□ 0.01
VSTM4-202ENST00000332853 PRDM15P57071 1507 aaPredicted RBP15.09■□□□□ 0.01
VSTM4-202ENST00000332853 WTAPQ15007 396 aa15.08■□□□□ 0.01
VSTM4-202ENST00000332853 HSP90B2PQ58FF3 399 aa15.08■□□□□ 0.01
VSTM4-202ENST00000332853 ZNF622Q969S3 477 aaKnown RBP eCLIP15.08■□□□□ 0.01
VSTM4-202ENST00000332853 F8W031 263 aaPredicted RBP15.08■□□□□ 0
VSTM4-202ENST00000332853 RNF113AO15541 343 aaKnown RBP15.08■□□□□ 0
VSTM4-202ENST00000332853 ZFYP08048 801 aaPredicted RBP15.08■□□□□ 0
VSTM4-202ENST00000332853 RAB3GAP1Q15042 981 aa15.08■□□□□ 0
VSTM4-202ENST00000332853 NOM1Q5C9Z4 860 aaKnown RBP15.08■□□□□ 0
VSTM4-202ENST00000332853 METTL22Q9BUU2 404 aaPredicted RBP15.08■□□□□ 0
VSTM4-202ENST00000332853 F13A1P00488 732 aa15.08■□□□□ 0
VSTM4-202ENST00000332853 EIF5P55010 431 aaKnown RBP15.08■□□□□ 0
VSTM4-202ENST00000332853 MAGEB6Q8N7X4 407 aa15.08■□□□□ 0
VSTM4-202ENST00000332853 TMX1Q9H3N1 280 aa15.08■□□□□ 0
VSTM4-202ENST00000332853 KAT14Q9H8E8 782 aa15.08■□□□□ 0
VSTM4-202ENST00000332853 CCDC194A0A1B0GVG4 234 aa15.08■□□□□ 0
VSTM4-202ENST00000332853 RXRAP19793 462 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 EIF4A1P60842 406 aaKnown RBP15.07■□□□□ 0
VSTM4-202ENST00000332853 ZBTB43O43298 467 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 PRC1O43663 620 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 RUFY3Q7L099 469 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 IL17REQ8NFR9 667 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 ALG1Q9BT22 464 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 HECW2Q9P2P5 1572 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 PDE4BQ07343 736 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 LRSAM1Q6UWE0 723 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 TRMT1Q9NXH9 659 aaKnown RBP15.07■□□□□ 0
VSTM4-202ENST00000332853 MYOM2P54296 1465 aa15.07■□□□□ 0
VSTM4-202ENST00000332853 CTAGE5O15320 804 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 SYCP1Q15431 976 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 CPLX3Q8WVH0 158 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 INSRP06213 1382 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 ZNF830Q96NB3 372 aaPredicted RBP15.06■□□□□ 0
VSTM4-202ENST00000332853 EFCAB6Q5THR3 1501 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 PLBD2Q8NHP8 589 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 FAM227BQ96M60 508 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 CRNKL1Q9BZJ0 848 aaKnown RBP15.06■□□□□ 0
VSTM4-202ENST00000332853 SFPQP23246 707 aaKnown RBP eCLIP15.06■□□□□ 0
VSTM4-202ENST00000332853 ST5P78524 1137 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 NLRP3Q96P20 1036 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 ACBD3Q9H3P7 528 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 STX1AQ16623 288 aa15.06■□□□□ 0
VSTM4-202ENST00000332853 ZSCAN16Q9H4T2 348 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms