RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 HMG20BQ9P0W2 317 aa13.27□□□□□ -0.29
GINS3-202ENST00000328514 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
GINS3-202ENST00000328514 SLU7O95391 586 aaKnown RBP13.26□□□□□ -0.29
GINS3-202ENST00000328514 H2AFXP16104 143 aaPredicted RBP13.26□□□□□ -0.29
GINS3-202ENST00000328514 RESTQ13127 1097 aa13.26□□□□□ -0.29
GINS3-202ENST00000328514 STX1AQ16623 288 aa13.26□□□□□ -0.29
GINS3-202ENST00000328514 HDGFL1Q5TGJ6 251 aa13.26□□□□□ -0.29
GINS3-202ENST00000328514 LARP1Q6PKG0 1096 aaKnown RBP13.26□□□□□ -0.29
GINS3-202ENST00000328514 BLOC1S2Q6QNY1 142 aa13.26□□□□□ -0.29
GINS3-202ENST00000328514 IL17REQ8NFR9 667 aa13.26□□□□□ -0.29
GINS3-202ENST00000328514 CHMP3Q9Y3E7 222 aa13.26□□□□□ -0.29
GINS3-202ENST00000328514 NWD1Q149M9 1564 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 MED23Q9ULK4 1368 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 USP27XA6NNY8 438 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 GSDMDP57764 484 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 TOB2Q14106 344 aaPredicted RBP13.25□□□□□ -0.29
GINS3-202ENST00000328514 DHX8Q14562 1220 aaKnown RBP13.25□□□□□ -0.29
GINS3-202ENST00000328514 OSBPL5Q9H0X9 879 aaPredicted RBP13.25□□□□□ -0.29
GINS3-202ENST00000328514 PHAXQ9H814 394 aaKnown RBP13.25□□□□□ -0.29
GINS3-202ENST00000328514 CFAP45Q9UL16 551 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 BICD2Q8TD16 824 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 DNAAF4Q8WXU2 420 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 BBXQ8WY36 941 aaPredicted RBP13.25□□□□□ -0.29
GINS3-202ENST00000328514 TIGD1Q96MW7 591 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 CALCOCO1Q9P1Z2 691 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 IMPACTQ9P2X3 320 aa13.25□□□□□ -0.29
GINS3-202ENST00000328514 TFIP11Q9UBB9 837 aaKnown RBP13.25□□□□□ -0.29
GINS3-202ENST00000328514 SETD1BQ9UPS6 1966 aaKnown RBP13.25□□□□□ -0.29
GINS3-202ENST00000328514 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.24□□□□□ -0.29
GINS3-202ENST00000328514 ROBO2Q9HCK4 1378 aa13.24□□□□□ -0.29
GINS3-202ENST00000328514 CCDC69A6NI79 296 aa13.24□□□□□ -0.29
GINS3-202ENST00000328514 HDAC5Q9UQL6 1122 aa13.24□□□□□ -0.29
GINS3-202ENST00000328514 CEMIPQ8WUJ3 1361 aa13.24□□□□□ -0.29
GINS3-202ENST00000328514 TULP2O00295 520 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
GINS3-202ENST00000328514 BMS1Q14692 1282 aaKnown RBP13.23□□□□□ -0.29
GINS3-202ENST00000328514 USPL1Q5W0Q7 1092 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 ATL3Q6DD88 541 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 NECTIN2Q92692 538 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 GTF3C6Q969F1 213 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 ZNF446Q9NWS9 450 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 RCOR1Q9UKL0 485 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 KRT32Q14532 448 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 ELF2Q15723 593 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 CCDC93Q567U6 631 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 C11orf57Q6ZUT1 292 aaPredicted RBP13.23□□□□□ -0.29
GINS3-202ENST00000328514 DHX40Q8IX18 779 aaKnown RBP13.23□□□□□ -0.29
GINS3-202ENST00000328514 ZNF592Q92610 1267 aa13.23□□□□□ -0.29
GINS3-202ENST00000328514 ALDH1L1O75891 902 aa13.22□□□□□ -0.29
GINS3-202ENST00000328514 IFIT2P09913 472 aaKnown RBP13.22□□□□□ -0.29
GINS3-202ENST00000328514 ADD1P35611 737 aaKnown RBP13.22□□□□□ -0.29
GINS3-202ENST00000328514 NMIQ13287 307 aaPredicted RBP13.22□□□□□ -0.29
GINS3-202ENST00000328514 ARID5BQ14865 1188 aa13.22□□□□□ -0.29
GINS3-202ENST00000328514 ANO10Q9NW15 660 aa13.22□□□□□ -0.29
GINS3-202ENST00000328514 RGS17Q9UGC6 210 aaPredicted RBP13.22□□□□□ -0.29
GINS3-202ENST00000328514 PSDA5PKW4 1024 aaPredicted RBP13.21□□□□□ -0.29
GINS3-202ENST00000328514 CYP2C19P33261 490 aa13.21□□□□□ -0.29
GINS3-202ENST00000328514 KCNJ4P48050 445 aa13.21□□□□□ -0.29
GINS3-202ENST00000328514 OS9Q13438 667 aaPredicted RBP13.21□□□□□ -0.29
GINS3-202ENST00000328514 NAA16Q6N069 864 aaPredicted RBP13.21□□□□□ -0.29
GINS3-202ENST00000328514 FAM227BQ96M60 508 aa13.21□□□□□ -0.29
GINS3-202ENST00000328514 LLPHQ9BRT6 129 aaKnown RBP13.21□□□□□ -0.29
GINS3-202ENST00000328514 DTNBO60941 627 aa13.21□□□□□ -0.3
GINS3-202ENST00000328514 SNW1Q13573 536 aaKnown RBP13.21□□□□□ -0.3
GINS3-202ENST00000328514 COL9A3Q14050 684 aaPredicted RBP13.21□□□□□ -0.3
GINS3-202ENST00000328514 ENGASEQ8NFI3 743 aa13.21□□□□□ -0.3
GINS3-202ENST00000328514 SMARCC2Q8TAQ2 1214 aa13.21□□□□□ -0.3
GINS3-202ENST00000328514 USP16Q9Y5T5 823 aa13.21□□□□□ -0.3
GINS3-202ENST00000328514 KDM3BQ7LBC6 1761 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 PI4KAP2A4QPH2 592 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 BECN2A8MW95 431 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 TOM1O60784 492 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 EIF4A1P60842 406 aaKnown RBP13.2□□□□□ -0.3
GINS3-202ENST00000328514 IRX5P78411 483 aaPredicted RBP13.2□□□□□ -0.3
GINS3-202ENST00000328514 PI4KAP1Q8N8J0 262 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 CCDC150Q8NCX0 1101 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 BRF1Q92994 677 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 BPIFA3Q9BQP9 254 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 FHOD1Q9Y613 1164 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 MYH15Q9Y2K3 1946 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 USP54Q70EL1 1684 aa13.2□□□□□ -0.3
GINS3-202ENST00000328514 AMPHP49418 695 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 FAM160A1Q05DH4 1040 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 NBPF11Q86T75 865 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 CEP57L1Q8IYX8 460 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 DDX54Q8TDD1 881 aaKnown RBP13.19□□□□□ -0.3
GINS3-202ENST00000328514 NAT10Q9H0A0 1025 aaKnown RBP13.19□□□□□ -0.3
GINS3-202ENST00000328514 RFX7Q2KHR2 1363 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 MRC1P22897 1456 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 A0A0D9SFI3 127 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 E4F1Q66K89 784 aaPredicted RBP13.19□□□□□ -0.3
GINS3-202ENST00000328514 AACSQ86V21 672 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 NOL10Q9BSC4 688 aaKnown RBP13.19□□□□□ -0.3
GINS3-202ENST00000328514 TSPYL1Q9H0U9 437 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 ADAMTS13Q76LX8 1427 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 SLIT1O75093 1534 aa13.19□□□□□ -0.3
GINS3-202ENST00000328514 ATP8B1O43520 1251 aa13.18□□□□□ -0.3
GINS3-202ENST00000328514 TAF5LO75529 589 aa13.18□□□□□ -0.3
GINS3-202ENST00000328514 ZRANB2O95218 330 aaKnown RBP eCLIP13.18□□□□□ -0.3
GINS3-202ENST00000328514 CCAR1Q8IX12 1150 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms