RNA–Protein interactions for RNA: ENST00000326335.8

CUL4A-201, Transcript of cullin 4A, humanhuman

TSL 1 (best) BASIC

Gene CUL4A, Length 3,705 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-201ENST00000326335 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
CUL4A-201ENST00000326335 CNNM1Q9NRU3 951 aa12.74□□□□□ -0.37
CUL4A-201ENST00000326335 TOMM22Q9NS69 142 aa12.74□□□□□ -0.37
CUL4A-201ENST00000326335 TPCN1Q9ULQ1 816 aa12.74□□□□□ -0.37
CUL4A-201ENST00000326335 CWC22Q9HCG8 908 aaKnown RBP12.74□□□□□ -0.37
CUL4A-201ENST00000326335 GPHNQ9NQX3 736 aaPredicted RBP12.74□□□□□ -0.37
CUL4A-201ENST00000326335 SLC27A2O14975 620 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 BRF1Q92994 677 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 TRMT112Q9UI30 125 aaKnown RBP12.73□□□□□ -0.37
CUL4A-201ENST00000326335 A0A1B0GUL7 405 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 IDH1O75874 414 aaKnown RBP12.73□□□□□ -0.37
CUL4A-201ENST00000326335 SKOR2Q2VWA4 1001 aaPredicted RBP12.73□□□□□ -0.37
CUL4A-201ENST00000326335 PLBD2Q8NHP8 589 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 CHD2O14647 1828 aaKnown RBP12.73□□□□□ -0.37
CUL4A-201ENST00000326335 WDR17Q8IZU2 1322 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 STX6O43752 255 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 RXRAP19793 462 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 KLHL40Q2TBA0 621 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 CCDC144CPQ8IYA2 1237 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 CEP126Q9P2H0 1117 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 ZBTB1Q9Y2K1 713 aa12.73□□□□□ -0.37
CUL4A-201ENST00000326335 TAF5LO75529 589 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 KIF6Q6ZMV9 814 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 HDAC5Q9UQL6 1122 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 JAG2Q9Y219 1238 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 METTL24Q5JXM2 366 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 GIMAP6Q6P9H5 292 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 LDHAL6AQ6ZMR3 332 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 DNAJC5Q9H3Z4 198 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 NPHP1O15259 732 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 TTC39AQ5SRH9 613 aa12.72□□□□□ -0.37
CUL4A-201ENST00000326335 ZNF830Q96NB3 372 aaPredicted RBP12.72□□□□□ -0.37
CUL4A-201ENST00000326335 TTC41PQ6P2S7 1318 aa12.71□□□□□ -0.37
CUL4A-201ENST00000326335 KDM4FA0A1W2PPD8 638 aa12.71□□□□□ -0.37
CUL4A-201ENST00000326335 GOLGA6L4A6NEF3 574 aa12.71□□□□□ -0.37
CUL4A-201ENST00000326335 CCDC82Q8N4S0 544 aa12.71□□□□□ -0.37
CUL4A-201ENST00000326335 A0A087WWV3 80 aa12.71□□□□□ -0.37
CUL4A-201ENST00000326335 SCARF1Q14162 830 aa12.71□□□□□ -0.38
CUL4A-201ENST00000326335 OTUD7BQ6GQQ9 843 aa12.71□□□□□ -0.38
CUL4A-201ENST00000326335 CDC37L1Q7L3B6 337 aa12.71□□□□□ -0.38
CUL4A-201ENST00000326335 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 FSD2A1L4K1 749 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 H3BQV1 296 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 APOBRQ0VD83 1088 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 IFFO2Q5TF58 517 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 Q6ZUG5 572 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 CKAP2LQ8IYA6 745 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 TNS3Q68CZ2 1445 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 ERCC4Q92889 916 aaPredicted RBP12.7□□□□□ -0.38
CUL4A-201ENST00000326335 NCOA3Q9Y6Q9 1424 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 EXOC5O00471 708 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 GREM2Q9H772 168 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 PAG1Q9NWQ8 432 aa12.7□□□□□ -0.38
CUL4A-201ENST00000326335 BRD1O95696 1058 aa12.69□□□□□ -0.38
CUL4A-201ENST00000326335 RNF20Q5VTR2 975 aa12.69□□□□□ -0.38
CUL4A-201ENST00000326335 FAM184AQ8NB25 1140 aa12.69□□□□□ -0.38
CUL4A-201ENST00000326335 FTOQ9C0B1 505 aaKnown RBP eCLIP12.69□□□□□ -0.38
CUL4A-201ENST00000326335 GTF2E1P29083 439 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-201ENST00000326335 IFIT5Q13325 482 aaKnown RBP12.69□□□□□ -0.38
CUL4A-201ENST00000326335 INCENPQ9NQS7 918 aa12.69□□□□□ -0.38
CUL4A-201ENST00000326335 GJB4Q9NTQ9 266 aa12.69□□□□□ -0.38
CUL4A-201ENST00000326335 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-201ENST00000326335 WDR33Q9C0J8 1336 aaKnown RBP12.69□□□□□ -0.38
CUL4A-201ENST00000326335 MCM2P49736 904 aa12.69□□□□□ -0.38
CUL4A-201ENST00000326335 MED1Q15648 1581 aaPredicted RBP12.69□□□□□ -0.38
CUL4A-201ENST00000326335 RRP12Q5JTH9 1297 aaKnown RBP12.69□□□□□ -0.38
CUL4A-201ENST00000326335 DENND2AQ9ULE3 1009 aa12.68□□□□□ -0.38
CUL4A-201ENST00000326335 HEG1Q9ULI3 1381 aa12.68□□□□□ -0.38
CUL4A-201ENST00000326335 KCNQ2O43526 872 aa12.68□□□□□ -0.38
CUL4A-201ENST00000326335 CYP21A2P08686 494 aa12.68□□□□□ -0.38
CUL4A-201ENST00000326335 ZAP70P43403 619 aa12.68□□□□□ -0.38
CUL4A-201ENST00000326335 ANAPC15P60006 121 aa12.68□□□□□ -0.38
CUL4A-201ENST00000326335 MTX1Q13505 466 aa12.68□□□□□ -0.38
CUL4A-201ENST00000326335 WTIPA6NIX2 430 aaPredicted RBP12.67□□□□□ -0.38
CUL4A-201ENST00000326335 STARD3NLO95772 234 aa12.67□□□□□ -0.38
CUL4A-201ENST00000326335 ZSCAN22P10073 491 aaPredicted RBP12.67□□□□□ -0.38
CUL4A-201ENST00000326335 FOXO4P98177 505 aa12.67□□□□□ -0.38
CUL4A-201ENST00000326335 SPC24Q8NBT2 197 aa12.67□□□□□ -0.38
CUL4A-201ENST00000326335 ATG3Q9NT62 314 aa12.67□□□□□ -0.38
CUL4A-201ENST00000326335 CYP2E1P05181 493 aaPredicted RBP12.67□□□□□ -0.38
CUL4A-201ENST00000326335 RFX5P48382 616 aaPredicted RBP12.67□□□□□ -0.38
CUL4A-201ENST00000326335 NECTIN1Q15223 517 aa12.67□□□□□ -0.38
CUL4A-201ENST00000326335 NEK1Q96PY6 1258 aa12.67□□□□□ -0.38
CUL4A-201ENST00000326335 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
CUL4A-201ENST00000326335 FAM208AQ9UK61 1670 aaKnown RBP12.67□□□□□ -0.38
CUL4A-201ENST00000326335 ITGA6P23229 1130 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 ATP6V1AP38606 617 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 BICD2Q8TD16 824 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 XAGE2Q96GT9 111 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 MARF1Q9Y4F3 1742 aaKnown RBP12.66□□□□□ -0.38
CUL4A-201ENST00000326335 ESPNB1AK53 854 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 EYA2O00167 538 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 LRP10Q7Z4F1 713 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 SEC31BQ9NQW1 1179 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 IRS4O14654 1257 aaPredicted RBP12.66□□□□□ -0.38
CUL4A-201ENST00000326335 CCDC158Q5M9N0 1113 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 ATG9AQ7Z3C6 839 aa12.66□□□□□ -0.38
CUL4A-201ENST00000326335 DZIP3Q86Y13 1208 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms