RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.44□□□□□ -0.42
ABCF1-201ENST00000326195 SYCE3A1L190 88 aa12.44□□□□□ -0.42
ABCF1-201ENST00000326195 PRPF40AO75400 957 aaKnown RBP12.44□□□□□ -0.42
ABCF1-201ENST00000326195 BABAM1Q9NWV8 329 aa12.44□□□□□ -0.42
ABCF1-201ENST00000326195 TMEM63CQ9P1W3 806 aa12.44□□□□□ -0.42
ABCF1-201ENST00000326195 SMARCA5O60264 1052 aaPredicted RBP12.43□□□□□ -0.42
ABCF1-201ENST00000326195 PTMSP20962 102 aa12.43□□□□□ -0.42
ABCF1-201ENST00000326195 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
ABCF1-201ENST00000326195 DNTTIP2Q5QJE6 756 aaKnown RBP12.43□□□□□ -0.42
ABCF1-201ENST00000326195 SRGAP3O43295 1099 aa12.43□□□□□ -0.42
ABCF1-201ENST00000326195 TAF7LQ5H9L4 462 aa12.43□□□□□ -0.42
ABCF1-201ENST00000326195 TBC1D9BQ66K14 1250 aa12.43□□□□□ -0.42
ABCF1-201ENST00000326195 NBPF5PQ86XG9 351 aaPredicted RBP12.43□□□□□ -0.42
ABCF1-201ENST00000326195 ZNF594Q96JF6 807 aaPredicted RBP12.43□□□□□ -0.42
ABCF1-201ENST00000326195 STK32BQ9NY57 414 aa12.43□□□□□ -0.42
ABCF1-201ENST00000326195 USP44Q9H0E7 712 aa12.43□□□□□ -0.42
ABCF1-201ENST00000326195 PLBD2Q8NHP8 589 aa12.42□□□□□ -0.42
ABCF1-201ENST00000326195 SETDB2Q96T68 719 aa12.42□□□□□ -0.42
ABCF1-201ENST00000326195 IL1RAPL2Q9NP60 686 aa12.42□□□□□ -0.42
ABCF1-201ENST00000326195 COL23A1Q86Y22 540 aaPredicted RBP12.42□□□□□ -0.42
ABCF1-201ENST00000326195 LETM1O95202 739 aaPredicted RBP12.42□□□□□ -0.42
ABCF1-201ENST00000326195 EIF5P55010 431 aaKnown RBP12.42□□□□□ -0.42
ABCF1-201ENST00000326195 BEND3Q5T5X7 828 aa12.42□□□□□ -0.42
ABCF1-201ENST00000326195 METTL22Q9BUU2 404 aaPredicted RBP12.42□□□□□ -0.42
ABCF1-201ENST00000326195 CGNQ9P2M7 1197 aaKnown RBP12.42□□□□□ -0.42
ABCF1-201ENST00000326195 CCDC39Q9UFE4 941 aa12.42□□□□□ -0.42
ABCF1-201ENST00000326195 ADCY9O60503 1353 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 MCM5P33992 734 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 NUCB1Q02818 461 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 EPHA10Q5JZY3 1008 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 TSHZ3Q63HK5 1081 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 LMBR1LQ6UX01 489 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 HELBQ8NG08 1087 aaPredicted RBP12.41□□□□□ -0.42
ABCF1-201ENST00000326195 CWC25Q9NXE8 425 aaPredicted RBP12.41□□□□□ -0.42
ABCF1-201ENST00000326195 USP54Q70EL1 1684 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 NEURL1BA8MQ27 555 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 ZBTB7BO15156 539 aaPredicted RBP12.41□□□□□ -0.42
ABCF1-201ENST00000326195 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
ABCF1-201ENST00000326195 U2AF2P26368 475 aaKnown RBP eCLIP12.41□□□□□ -0.423e-7■■■□□ 18.3
ABCF1-201ENST00000326195 IL6STP40189 918 aaPredicted RBP12.41□□□□□ -0.42
ABCF1-201ENST00000326195 CCT4P50991 539 aaKnown RBP12.41□□□□□ -0.42
ABCF1-201ENST00000326195 SUSD4Q5VX71 490 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 PNMA6EA0A0J9YXQ4 647 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 HMMRO75330 724 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 HOXB7P09629 217 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 SUCLG2Q96I99 432 aa12.41□□□□□ -0.42
ABCF1-201ENST00000326195 PTPRCP08575 1304 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 NRAPQ86VF7 1730 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 GRM8O00222 908 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 RPS6KA4O75676 772 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 SLC51AQ86UW1 340 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 BICC1Q9H694 974 aaKnown RBP12.4□□□□□ -0.42
ABCF1-201ENST00000326195 BCL2L12Q9HB09 334 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 MAP3K15Q6ZN16 1313 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 SNAP23O00161 211 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 CDC45O75419 566 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 GNAI2P04899 355 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 TCIRG1Q13488 830 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 GCKRQ14397 625 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 PPP1R42Q7Z4L9 355 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 LINS1Q8NG48 757 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.42
ABCF1-201ENST00000326195 COL15A1P39059 1388 aa12.39□□□□□ -0.43
ABCF1-201ENST00000326195 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.432e-6■■■■■ 28.9
ABCF1-201ENST00000326195 CYP2E1P05181 493 aaPredicted RBP12.39□□□□□ -0.43
ABCF1-201ENST00000326195 MMP10P09238 476 aa12.39□□□□□ -0.43
ABCF1-201ENST00000326195 KIAA2012Q0VF49 1180 aa12.39□□□□□ -0.43
ABCF1-201ENST00000326195 IPO4Q8TEX9 1081 aaKnown RBP12.39□□□□□ -0.43
ABCF1-201ENST00000326195 ZDHHC9Q9Y397 364 aa12.39□□□□□ -0.43
ABCF1-201ENST00000326195 FOXD4L5Q5VV16 416 aaPredicted RBP12.39□□□□□ -0.43
ABCF1-201ENST00000326195 LRSAM1Q6UWE0 723 aa12.39□□□□□ -0.43
ABCF1-201ENST00000326195 FOXD4L4Q8WXT5 416 aaPredicted RBP12.39□□□□□ -0.43
ABCF1-201ENST00000326195 IRS4O14654 1257 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-201ENST00000326195 ERFEQ4G0M1 354 aa12.38□□□□□ -0.43
ABCF1-201ENST00000326195 GIGYF2Q6Y7W6 1299 aaKnown RBP12.38□□□□□ -0.43
ABCF1-201ENST00000326195 TBC1D9Q6ZT07 1266 aa12.38□□□□□ -0.43
ABCF1-201ENST00000326195 ZGPATQ8N5A5 531 aaKnown RBP12.38□□□□□ -0.43
ABCF1-201ENST00000326195 PTMAP06454 111 aaKnown RBP12.38□□□□□ -0.43
ABCF1-201ENST00000326195 TTC12Q9H892 705 aaPredicted RBP12.38□□□□□ -0.43
ABCF1-201ENST00000326195 PARP4Q9UKK3 1724 aaKnown RBP12.38□□□□□ -0.43
ABCF1-201ENST00000326195 LRRC37A3O60309 1634 aa12.38□□□□□ -0.43
ABCF1-201ENST00000326195 NFIXQ14938 502 aa12.38□□□□□ -0.43
ABCF1-201ENST00000326195 BMP2KLQ5H9B9 411 aa12.38□□□□□ -0.43
ABCF1-201ENST00000326195 ARHGAP45Q92619 1136 aa12.38□□□□□ -0.43
ABCF1-201ENST00000326195 CAMKK2Q96RR4 588 aa12.38□□□□□ -0.43
ABCF1-201ENST00000326195 CAMTA2O94983 1202 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 GTF2F1P35269 517 aaKnown RBP eCLIP12.37□□□□□ -0.43
ABCF1-201ENST00000326195 SLC15A2Q16348 729 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 C16orf71Q8IYS4 520 aaPredicted RBP12.37□□□□□ -0.43
ABCF1-201ENST00000326195 SEC31BQ9NQW1 1179 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 NWD2Q9ULI1 1742 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 NOLC1Q14978 699 aaKnown RBP eCLIP12.37□□□□□ -0.43
ABCF1-201ENST00000326195 LRP10Q7Z4F1 713 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 NLRP10Q86W26 655 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 ZNF622Q969S3 477 aaKnown RBP eCLIP12.37□□□□□ -0.432e-8■■■■□ 24.2
ABCF1-201ENST00000326195 ZNF652Q9Y2D9 606 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 DOT1LQ8TEK3 1739 aa12.37□□□□□ -0.43
ABCF1-201ENST00000326195 GNAI3P08754 354 aa12.36□□□□□ -0.43
ABCF1-201ENST00000326195 UBN2Q6ZU65 1347 aa12.36□□□□□ -0.43
ABCF1-201ENST00000326195 NEUROD6Q96NK8 337 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms