RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 ISM2Q6H9L7 571 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 CRNKL1Q9BZJ0 848 aaKnown RBP24.04■■□□□ 1.44
RNF40-201ENST00000324685 MBIPQ9NS73 344 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 ZBTB3Q9H5J0 574 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 NCOA1Q15788 1441 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 HCLS1P14317 486 aaPredicted RBP24.04■■□□□ 1.44
RNF40-201ENST00000324685 ARHGAP45Q92619 1136 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 ZFYP08048 801 aaPredicted RBP24.04■■□□□ 1.44
RNF40-201ENST00000324685 RASAL2Q9UJF2 1139 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 WTAPQ15007 396 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 GIMAP6Q6P9H5 292 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 TMTC2Q8N394 836 aa24.04■■□□□ 1.44
RNF40-201ENST00000324685 PTPN23Q9H3S7 1636 aa24.03■■□□□ 1.44
RNF40-201ENST00000324685 SREK1Q8WXA9 508 aaKnown RBP24.03■■□□□ 1.44
RNF40-201ENST00000324685 SELENOOQ9BVL4 669 aa24.03■■□□□ 1.44
RNF40-201ENST00000324685 PRPHP41219 470 aa24.03■■□□□ 1.44
RNF40-201ENST00000324685 VAT1LQ9HCJ6 419 aa24.03■■□□□ 1.44
RNF40-201ENST00000324685 USP37Q86T82 979 aa24.03■■□□□ 1.44
RNF40-201ENST00000324685 KLF18A0A0U1RQI7 1052 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 CNNM2Q9H8M5 875 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 PPP1R14CQ8TAE6 165 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 TTC12Q9H892 705 aaPredicted RBP24.02■■□□□ 1.44
RNF40-201ENST00000324685 ANO6Q4KMQ2 910 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 IFNL2Q8IZJ0 200 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 MRPS27Q92552 414 aaKnown RBP24.02■■□□□ 1.44
RNF40-201ENST00000324685 PUF60Q9UHX1 559 aaKnown RBP24.02■■□□□ 1.44
RNF40-201ENST00000324685 IVLP07476 585 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 STAT6P42226 847 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 PIP4K2BP78356 416 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 FAM200AQ8TCP9 573 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 TRERF1Q96PN7 1200 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 ANKRD36BQ8N2N9 1353 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 TOPBP1Q92547 1522 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 GPTP24298 496 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 HSPA4P34932 840 aa24.02■■□□□ 1.44
RNF40-201ENST00000324685 SRRTQ9BXP5 876 aaKnown RBP24.01■■□□□ 1.43
RNF40-201ENST00000324685 A0A1W2PRG0 241 aa24.01■■□□□ 1.43
RNF40-201ENST00000324685 RHPN1Q8TCX5 695 aa24.01■■□□□ 1.43
RNF40-201ENST00000324685 ZSWIM4Q9H7M6 989 aa24.01■■□□□ 1.43
RNF40-201ENST00000324685 SNRKQ9NRH2 765 aa24.01■■□□□ 1.43
RNF40-201ENST00000324685 PODXL2Q9NZ53 605 aa24.01■■□□□ 1.43
RNF40-201ENST00000324685 MAGI1Q96QZ7 1491 aaPredicted RBP24.01■■□□□ 1.43
RNF40-201ENST00000324685 SPDYE4A6NLX3 237 aa24.01■■□□□ 1.43
RNF40-201ENST00000324685 SKILP12757 684 aa24■■□□□ 1.43
RNF40-201ENST00000324685 BRF1Q92994 677 aa24■■□□□ 1.43
RNF40-201ENST00000324685 ARFGAP3Q9NP61 516 aa24■■□□□ 1.43
RNF40-201ENST00000324685 SAMM50Q9Y512 469 aa24■■□□□ 1.43
RNF40-201ENST00000324685 ZBTB43O43298 467 aa24■■□□□ 1.43
RNF40-201ENST00000324685 IGHDP01880 384 aa24■■□□□ 1.43
RNF40-201ENST00000324685 SPAG5Q96R06 1193 aa24■■□□□ 1.43
RNF40-201ENST00000324685 STMN4Q9H169 189 aaPredicted RBP24■■□□□ 1.43
RNF40-201ENST00000324685 OPA1O60313 960 aa24■■□□□ 1.43
RNF40-201ENST00000324685 TRAF1Q13077 416 aa24■■□□□ 1.43
RNF40-201ENST00000324685 DDX46Q7L014 1031 aaKnown RBP24■■□□□ 1.43
RNF40-201ENST00000324685 MPHOSPH6Q99547 160 aaKnown RBP24■■□□□ 1.43
RNF40-201ENST00000324685 ARHGEF11O15085 1522 aa24■■□□□ 1.43
RNF40-201ENST00000324685 PABPN1LA6NDY0 278 aaKnown RBP24■■□□□ 1.43
RNF40-201ENST00000324685 GRIPAP1Q4V328 841 aa24■■□□□ 1.43
RNF40-201ENST00000324685 ALG1Q9BT22 464 aa24■■□□□ 1.43
RNF40-201ENST00000324685 C6orf229H3BNL8 230 aa23.99■■□□□ 1.43
RNF40-201ENST00000324685 WDR78Q5VTH9 848 aa23.99■■□□□ 1.43
RNF40-201ENST00000324685 NOLC1Q14978 699 aaKnown RBP eCLIP23.99■■□□□ 1.43
RNF40-201ENST00000324685 BICD1Q96G01 975 aa23.99■■□□□ 1.43
RNF40-201ENST00000324685 KIF14Q15058 1648 aa23.99■■□□□ 1.43
RNF40-201ENST00000324685 UBE3BQ7Z3V4 1068 aa23.99■■□□□ 1.43
RNF40-201ENST00000324685 TIGD1Q96MW7 591 aa23.99■■□□□ 1.43
RNF40-201ENST00000324685 PI4KAP2A4QPH2 592 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 PI4KAP1Q8N8J0 262 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 CNPY2Q9Y2B0 182 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 C11orf95C9JLR9 678 aaPredicted RBP23.98■■□□□ 1.43
RNF40-201ENST00000324685 RAB11FIP4Q86YS3 637 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 FBF1Q8TES7 1133 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 LRRC45Q96CN5 670 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 TACC1O75410 805 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 RALGAPBQ86X10 1494 aa23.98■■□□□ 1.43
RNF40-201ENST00000324685 SNRPA1P09661 255 aaKnown RBP23.97■■□□□ 1.43
RNF40-201ENST00000324685 SDSP20132 328 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 USP48Q86UV5 1035 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 ANKRD24Q8TF21 1146 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 CCDC77Q9BR77 488 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 KRT13P13646 458 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 TUBB4BP68371 445 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 RTN1Q16799 776 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 ESR2Q92731 530 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 EXOC5O00471 708 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 AFMP43652 599 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 GNAQP50148 359 aa23.97■■□□□ 1.43
RNF40-201ENST00000324685 PSMA7O14818 248 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 DNAI1Q9UI46 699 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 IFIT1BQ5T764 474 aaKnown RBP23.96■■□□□ 1.43
RNF40-201ENST00000324685 LMBR1Q8WVP7 490 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 KIAA0586Q9BVV6 1533 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 ATP5J2-PTCD1G3V325 749 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 TSHZ3Q63HK5 1081 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 NECAB1Q8N987 351 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 ESYT1Q9BSJ8 1104 aa23.96■■□□□ 1.43
RNF40-201ENST00000324685 IQCGQ9H095 443 aaKnown RBP23.96■■□□□ 1.43
RNF40-201ENST00000324685 TTLL12Q14166 644 aaPredicted RBP23.96■■□□□ 1.43
RNF40-201ENST00000324685 KRT83P78385 493 aa23.95■■□□□ 1.43
RNF40-201ENST00000324685 KIF4AO95239 1232 aa23.95■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms