RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 ERCC5P28715 1186 aaPredicted RBP14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 GSTO1P78417 241 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 PPP4R3BQ5MIZ7 849 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 KRT13P13646 458 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 DNAAF4Q8WXU2 420 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 DDX19AQ9NUU7 478 aaKnown RBP14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 GAPVD1Q14C86 1478 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 DUSP27Q5VZP5 1158 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 GOLIM4O00461 696 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 LDHCP07864 332 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 SEPT6Q14141 434 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 FAM169AQ9Y6X4 670 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 GTF3C6Q969F1 213 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 LIMCH1Q9UPQ0 1083 aa14.64□□□□□ -0.07
SPTBN2-201ENST00000309996 RASA3Q14644 834 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 SMC6Q96SB8 1091 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 NFE2L2Q16236 605 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 MSL1Q68DK7 614 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 RPUSD2Q8IZ73 545 aaKnown RBP14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 TMEM110-MUSTN1A8MSY1 372 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 JDP2Q8WYK2 163 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 STMN4Q9H169 189 aaPredicted RBP14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 ARID5AQ03989 594 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 TTF1Q15361 905 aaPredicted RBP14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 CCDC50Q8IVM0 306 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 TBC1D31Q96DN5 1066 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 TRIM47Q96LD4 638 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 MSANTD4Q8NCY6 345 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 RMND1Q9NWS8 449 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 FCHSD2O94868 740 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 USP25Q9UHP3 1055 aa14.63□□□□□ -0.07
SPTBN2-201ENST00000309996 TSPY3P0CV98 308 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 TSPY8P0CW00 308 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 GPTP24298 496 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 POLA1P09884 1462 aaPredicted RBP14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 XRCC6P12956 609 aaKnown RBP eCLIP14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 CFAP157Q5JU67 520 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 CCDC65Q8IXS2 484 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 ERBINQ96RT1 1412 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 CALM1P0DP23 149 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 CALM2P0DP24 149 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 CALM3P0DP25 149 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 AKNAD1Q5T1N1 836 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 ZSWIM4Q9H7M6 989 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 ADCY5O95622 1261 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 GOLGA1Q92805 767 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 KCNH5Q8NCM2 988 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 SEPT10Q9P0V9 454 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 PRPHP41219 470 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 PAXBP1Q9Y5B6 917 aa14.62□□□□□ -0.07
SPTBN2-201ENST00000309996 DYNC1I1O14576 645 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 FAM13AO94988 1023 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 BRDTQ58F21 947 aaPredicted RBP14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 NBPF6Q5VWK0 638 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 PPP1R42Q7Z4L9 355 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 NBPF5PQ86XG9 351 aaPredicted RBP14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 NBPF4Q96M43 638 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 GJA3Q9Y6H8 435 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 IARSP41252 1262 aaKnown RBP14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 SLC8A3P57103 927 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 GNG11P61952 73 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 MFSD6Q6ZSS7 791 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 CCDC8Q9H0W5 538 aaPredicted RBP14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 HAUS2Q9NVX0 235 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 TRIM6Q9C030 488 aaPredicted RBP14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 ATP2A1O14983 1001 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 METAP2P50579 478 aaKnown RBP eCLIP14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.61□□□□□ -0.071e-6■■■□□ 14.8
SPTBN2-201ENST00000309996 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 NOP9Q86U38 636 aaKnown RBP14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 ATP6V1E1P36543 226 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 PANK2Q9BZ23 570 aa14.61□□□□□ -0.07
SPTBN2-201ENST00000309996 GJB2P29033 226 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 PICALMQ13492 652 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 TRAF1Q13077 416 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 CCDC77Q9BR77 488 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 HYPKQ9NX55 129 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 N4BP3O15049 544 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 STAT6P42226 847 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 CCDC114Q96M63 670 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 ZBTB21Q9ULJ3 1066 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 GIPC1O14908 333 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 KCNA4P22459 653 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 STX8Q9UNK0 236 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 AKR1B10O60218 316 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 CTAGE1Q96RT6 745 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 SLC26A6Q9BXS9 759 aa14.6□□□□□ -0.07
SPTBN2-201ENST00000309996 CCDC102BQ68D86 513 aa14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 CYLC1P35663 651 aaPredicted RBP14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 PLCB3Q01970 1234 aa14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 MICU3Q86XE3 530 aa14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 KIFC2Q96AC6 838 aa14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 SRRTQ9BXP5 876 aaKnown RBP14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 MCM10Q7L590 875 aa14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 EVI5LQ96CN4 794 aa14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 SETDB2Q96T68 719 aa14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 SUPT6HQ7KZ85 1726 aaKnown RBP14.59□□□□□ -0.07
SPTBN2-201ENST00000309996 OPA1O60313 960 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms