RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 CTNNA3Q9UI47 895 aa18.71■□□□□ 0.59
CGGBP1-201ENST00000309534 U3KPZ7 1027 aaPredicted RBP18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 COL15A1P39059 1388 aa18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 ITGA6P23229 1130 aa18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 EAF2Q96CJ1 260 aaPredicted RBP18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 HMG20BQ9P0W2 317 aa18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 AFF2P51816 1311 aa18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 PTPN12Q05209 780 aaKnown RBP18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 ZSCAN31Q96LW9 406 aaPredicted RBP18.7■□□□□ 0.58
CGGBP1-201ENST00000309534 NBPF5PQ86XG9 351 aaPredicted RBP18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 TICAM2Q86XR7 235 aa18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 GNPATO15228 680 aa18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 NFKBIBQ15653 356 aa18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 NAP1L2Q9ULW6 460 aaPredicted RBP18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 USP42Q9H9J4 1324 aaKnown RBP18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 LTBP4Q8N2S1 1624 aa18.69■□□□□ 0.58
CGGBP1-201ENST00000309534 SGSM2O43147 1006 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 TPTE2Q6XPS3 522 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 CLEC4GQ6UXB4 293 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 PLA2G12BQ9BX93 195 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 QTRT2Q9H974 415 aaKnown RBP18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 DISP2A7MBM2 1401 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 ATP6V1DQ9Y5K8 247 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 TRDNQ13061 729 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 ANKRD18AQ8IVF6 992 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 NLRP3Q96P20 1036 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 PAG1Q9NWQ8 432 aa18.68■□□□□ 0.58
CGGBP1-201ENST00000309534 A0A1B0GUL7 405 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 GOLIM4O00461 696 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 SKOR2Q2VWA4 1001 aaPredicted RBP18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 MROH5Q6ZUA9 1318 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 DBNDD2Q9BQY9 259 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 SASH1O94885 1247 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 EPHA10Q5JZY3 1008 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 TRAPPC3LQ5T215 181 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 BLOC1S2Q6QNY1 142 aa18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 FNBP4Q8N3X1 1017 aaPredicted RBP18.67■□□□□ 0.58
CGGBP1-201ENST00000309534 ANP32BQ92688 251 aaKnown RBP18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 FAM196AQ6ZSG2 479 aa18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 CSPP1Q1MSJ5 1256 aa18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 PI4K2BQ8TCG2 481 aa18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 PDIA4P13667 645 aaKnown RBP18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 CAVIN4Q5BKX8 364 aa18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 ZNF772Q68DY9 489 aaPredicted RBP18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 PRPF40BQ6NWY9 871 aaKnown RBP18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 JAKMIP1Q96N16 626 aaKnown RBP18.66■□□□□ 0.58
CGGBP1-201ENST00000309534 SMC3Q9UQE7 1217 aa18.65■□□□□ 0.58
CGGBP1-201ENST00000309534 APPP05067 770 aa18.65■□□□□ 0.58
CGGBP1-201ENST00000309534 NMIQ13287 307 aaPredicted RBP18.65■□□□□ 0.58
CGGBP1-201ENST00000309534 MCMDC2Q4G0Z9 681 aa18.65■□□□□ 0.58
CGGBP1-201ENST00000309534 PDRG1Q9NUG6 133 aa18.65■□□□□ 0.58
CGGBP1-201ENST00000309534 HSPA1LP34931 641 aa18.65■□□□□ 0.58
CGGBP1-201ENST00000309534 EIF5P55010 431 aaKnown RBP18.64■□□□□ 0.58
CGGBP1-201ENST00000309534 DDX46Q7L014 1031 aaKnown RBP18.64■□□□□ 0.58
CGGBP1-201ENST00000309534 ZNF594Q96JF6 807 aaPredicted RBP18.64■□□□□ 0.58
CGGBP1-201ENST00000309534 RALYLQ86SE5 291 aaKnown RBP18.64■□□□□ 0.57
CGGBP1-201ENST00000309534 SEPT12Q8IYM1 358 aa18.64■□□□□ 0.57
CGGBP1-201ENST00000309534 FOXO4P98177 505 aa18.64■□□□□ 0.57
CGGBP1-201ENST00000309534 HMGB1P09429 215 aaKnown RBP18.64■□□□□ 0.57
CGGBP1-201ENST00000309534 MAP3K12Q12852 859 aa18.64■□□□□ 0.57
CGGBP1-201ENST00000309534 PUM3Q15397 648 aaKnown RBP18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 HELLSQ9NRZ9 838 aa18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 NOL10Q9BSC4 688 aaKnown RBP18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 RC3H1Q5TC82 1133 aaKnown RBP18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 KBTBD3Q8NAB2 608 aa18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 CASTP20810 708 aaKnown RBP18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 HAUS7Q99871 368 aa18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 SH2B1Q9NRF2 756 aaPredicted RBP18.63■□□□□ 0.57
CGGBP1-201ENST00000309534 CCDC171Q6TFL3 1326 aa18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 HLFQ16534 295 aa18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 COL22A1Q8NFW1 1626 aaPredicted RBP18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 RPS6KA4O75676 772 aa18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 TIMM10P62072 90 aa18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 ST5P78524 1137 aa18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 XAGE2Q96GT9 111 aa18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 NACAP1Q9BZK3 213 aa18.62■□□□□ 0.57
CGGBP1-201ENST00000309534 HCLS1P14317 486 aaPredicted RBP18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 LPIN2Q92539 896 aa18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 RNF113AO15541 343 aaKnown RBP18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 IDH1O75874 414 aaKnown RBP18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 DBNLQ9UJU6 430 aaKnown RBP18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 RBM8AQ9Y5S9 174 aaKnown RBP18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 CRYBG1Q9Y4K1 1723 aa18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 SLIT2O94813 1529 aa18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 PHF14O94880 888 aa18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.61■□□□□ 0.57
CGGBP1-201ENST00000309534 ADAMTS7Q9UKP4 1686 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 IMMTQ16891 758 aaKnown RBP18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 RFX7Q2KHR2 1363 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 G3V3G9 751 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 RGL2O15211 777 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 DCAF8Q5TAQ9 597 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 LRP10Q7Z4F1 713 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 ANKRD2Q9GZV1 360 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 CNTNAP4Q9C0A0 1308 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 PDCP20941 246 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 HSPA4P34932 840 aa18.6■□□□□ 0.57
CGGBP1-201ENST00000309534 KAZALD1Q96I82 304 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms