RNA–Protein interactions for RNA: ENST00000300213.8

CCNDBP1-201, Transcript of cyclin D1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNDBP1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-201ENST00000300213 AIMP1Q12904 312 aaKnown RBP17.13■□□□□ 0.33
CCNDBP1-201ENST00000300213 MTHFSDQ2M296 383 aaKnown RBP17.13■□□□□ 0.33
CCNDBP1-201ENST00000300213 OTUD7BQ6GQQ9 843 aa17.13■□□□□ 0.33
CCNDBP1-201ENST00000300213 MRFAP1L1Q96HT8 127 aa17.13■□□□□ 0.33
CCNDBP1-201ENST00000300213 STAP2Q9UGK3 403 aa17.13■□□□□ 0.33
CCNDBP1-201ENST00000300213 LOC102724159A0A0B4J2E5 919 aa17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 SART3Q15020 963 aaKnown RBP17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 PWP2Q15269 919 aaKnown RBP17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 PI4K2BQ8TCG2 481 aa17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 ZSWIM6Q9HCJ5 1215 aa17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 MAP3K4Q9Y6R4 1608 aa17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 CASQ1P31415 396 aa17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 ECHDC1Q9NTX5 307 aa17.12■□□□□ 0.33
CCNDBP1-201ENST00000300213 SLC27A2O14975 620 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 IQCB1Q15051 598 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 PI4KAP2A4QPH2 592 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 PI4KAP1Q8N8J0 262 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 NCOA5Q9HCD5 579 aaKnown RBP17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 ETF1P62495 437 aaKnown RBP17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 ANKRD1Q15327 319 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 HSP90B2PQ58FF3 399 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 Q6ZUG5 572 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 ORC3Q9UBD5 711 aaPredicted RBP17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 RRP15Q9Y3B9 282 aaKnown RBP17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 SPHKAPQ2M3C7 1700 aa17.11■□□□□ 0.33
CCNDBP1-201ENST00000300213 DPCR1Q3MIW9 517 aa17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 USP28Q96RU2 1077 aa17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 PREX2Q70Z35 1606 aa17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 KIF24Q5T7B8 1368 aa17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 G3BP1Q13283 466 aaKnown RBP eCLIP17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 FBXO31Q5XUX0 539 aaPredicted RBP17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 WWC2Q6AWC2 1192 aa17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 SEC62Q99442 399 aaKnown RBP17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 CPLX3Q8WVH0 158 aa17.1■□□□□ 0.33
CCNDBP1-201ENST00000300213 RPGRIP1LQ68CZ1 1315 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 ADGRB2O60241 1585 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 FAM193AP78312 1265 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 CCDC12Q8WUD4 166 aaPredicted RBP17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 GOLPH3LQ9H4A5 285 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 UBASH3AP57075 661 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 NUDT16Q96DE0 195 aaKnown RBP17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 DEF6Q9H4E7 631 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 ADAM21Q9UKJ8 722 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 SSH2Q76I76 1423 aa17.09■□□□□ 0.33
CCNDBP1-201ENST00000300213 DHX16O60231 1041 aaKnown RBP17.08■□□□□ 0.33
CCNDBP1-201ENST00000300213 RHOXF2BP0C7M4 288 aa17.08■□□□□ 0.33
CCNDBP1-201ENST00000300213 TOP1P11387 765 aaKnown RBP17.08■□□□□ 0.33
CCNDBP1-201ENST00000300213 H2AFXP16104 143 aaPredicted RBP17.08■□□□□ 0.33
CCNDBP1-201ENST00000300213 RHOXF2Q9BQY4 288 aa17.08■□□□□ 0.33
CCNDBP1-201ENST00000300213 TULP2O00295 520 aa17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 ATP1A3P13637 1013 aa17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 ARMCX5Q6P1M9 558 aa17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 SRRTQ9BXP5 876 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 SLC3A2P08195 630 aaKnown RBP17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 CCDC150Q8NCX0 1101 aa17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 DESI2Q9BSY9 194 aa17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 LZTFL1Q9NQ48 299 aa17.08■□□□□ 0.32
CCNDBP1-201ENST00000300213 YTHDC2Q9H6S0 1430 aaKnown RBP17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 A0A0D9SFI3 127 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 CTAGE5O15320 804 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 HSP90AB4PQ58FF6 505 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 KLHDC4Q8TBB5 520 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 ELP1O95163 1332 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 CAVIN2O95810 425 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 MARCKSP29966 332 aaPredicted RBP17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 PUS7Q96PZ0 661 aaKnown RBP17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 PDE11AQ9HCR9 933 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 PPP2R3AQ06190 1150 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 SLFNL1Q499Z3 407 aa17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 DHX40Q8IX18 779 aaKnown RBP17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
CCNDBP1-201ENST00000300213 SALL3Q9BXA9 1300 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 SASH3O75995 380 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 PNPLA6Q8IY17 1366 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 SHROOM2Q13796 1616 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 APOBRQ0VD83 1088 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 USHBP1Q8N6Y0 703 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 MYOM2P54296 1465 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 DHX37Q8IY37 1157 aaKnown RBP17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 NEK1Q96PY6 1258 aa17.06■□□□□ 0.32
CCNDBP1-201ENST00000300213 JAKMIP3Q5VZ66 844 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 EVI5LQ96CN4 794 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 GDAP1L1Q96MZ0 367 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 PARD6BQ9BYG5 372 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 TULP4Q9NRJ4 1543 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 CHGBP05060 677 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 ESF1Q9H501 851 aaKnown RBP17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 CDC25BP30305 580 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 FANCCQ00597 558 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 FAM160A1Q05DH4 1040 aa17.05■□□□□ 0.32
CCNDBP1-201ENST00000300213 MICALL1Q8N3F8 863 aa17.04■□□□□ 0.32
CCNDBP1-201ENST00000300213 SSH3Q8TE77 659 aa17.04■□□□□ 0.32
CCNDBP1-201ENST00000300213 NECTIN1Q15223 517 aa17.04■□□□□ 0.32
CCNDBP1-201ENST00000300213 FOXR1Q6PIV2 292 aa17.04■□□□□ 0.32
CCNDBP1-201ENST00000300213 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
CCNDBP1-201ENST00000300213 QRICH2Q9H0J4 1663 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms