RNA–Protein interactions for RNA: ENST00000270066.10

SMG9-201, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG9, Length 5,510 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-201ENST00000270066 NEFHP12036 1026 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 MICU3Q86XE3 530 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 NEBLO76041 1014 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 LRRC27Q9C0I9 530 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 TSPYL1Q9H0U9 437 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 SEPT7Q16181 437 aaKnown RBP15.33■□□□□ 0.04
SMG9-201ENST00000270066 KLHL10Q6JEL2 608 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 PAXIP1Q6ZW49 1069 aaPredicted RBP15.33■□□□□ 0.04
SMG9-201ENST00000270066 STXBP4Q6ZWJ1 553 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 ESR2Q92731 530 aa15.33■□□□□ 0.04
SMG9-201ENST00000270066 TSPY3P0CV98 308 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 TSPY8P0CW00 308 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 SLC4A4Q9Y6R1 1079 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 STX6O43752 255 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 FSIP1Q8NA03 581 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 NAA16Q6N069 864 aaPredicted RBP15.32■□□□□ 0.04
SMG9-201ENST00000270066 CACNA2D4Q7Z3S7 1137 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 CCDC148Q8NFR7 591 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 HSPA2P54652 639 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 MCMDC2Q4G0Z9 681 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 EYA1Q99502 592 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 SLC26A6Q9BXS9 759 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 VAT1LQ9HCJ6 419 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 PARP3Q9Y6F1 533 aa15.32■□□□□ 0.04
SMG9-201ENST00000270066 RNMTO43148 476 aaKnown RBP15.31■□□□□ 0.04
SMG9-201ENST00000270066 SFPQP23246 707 aaKnown RBP eCLIP15.31■□□□□ 0.04
SMG9-201ENST00000270066 KANK3Q6NY19 840 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 ZRSR2Q15696 482 aaKnown RBP15.31■□□□□ 0.04
SMG9-201ENST00000270066 CCDC144CPQ8IYA2 1237 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 TBC1D2Q9BYX2 928 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 KIF2AO00139 706 aaPredicted RBP15.31■□□□□ 0.04
SMG9-201ENST00000270066 IGHDP01880 384 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 TSHZ3Q63HK5 1081 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 OGFOD1Q8N543 542 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 ZSCAN12O43309 604 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 PDE1AP54750 535 aa15.31■□□□□ 0.04
SMG9-201ENST00000270066 SSR1P43307 286 aaKnown RBP15.3■□□□□ 0.04
SMG9-201ENST00000270066 GNAQP50148 359 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 CHMP4BP1P59074 171 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 ANKRD2Q9GZV1 360 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 TRERF1Q96PN7 1200 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 ZSCAN16Q9H4T2 348 aaPredicted RBP15.3■□□□□ 0.04
SMG9-201ENST00000270066 CGNQ9P2M7 1197 aaKnown RBP15.3■□□□□ 0.04
SMG9-201ENST00000270066 TTC41PQ6P2S7 1318 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 EIF3JO75822 258 aaKnown RBP15.3■□□□□ 0.04
SMG9-201ENST00000270066 GNAT2P19087 354 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 SDSP20132 328 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 TESK2Q96S53 571 aa15.3■□□□□ 0.04
SMG9-201ENST00000270066 ABCA5Q8WWZ7 1642 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 EDC4Q6P2E9 1401 aaKnown RBP15.29■□□□□ 0.04
SMG9-201ENST00000270066 BMP15O95972 392 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 IBSPP21815 317 aaPredicted RBP15.29■□□□□ 0.04
SMG9-201ENST00000270066 SSFA2P28290 1259 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 POLD1P28340 1107 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 CETN1Q12798 172 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 IFIT1BQ5T764 474 aaKnown RBP15.29■□□□□ 0.04
SMG9-201ENST00000270066 NBPF14Q5TI25 921 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 IRS4O14654 1257 aaPredicted RBP15.29■□□□□ 0.04
SMG9-201ENST00000270066 NBPF7P0C2Y1 421 aaPredicted RBP15.29■□□□□ 0.04
SMG9-201ENST00000270066 TOP1P11387 765 aaKnown RBP15.29■□□□□ 0.04
SMG9-201ENST00000270066 PLCG2P16885 1265 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 DISP1Q96F81 1524 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 KLF18A0A0U1RQI7 1052 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 ZBTB43O43298 467 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 BABAM1Q9NWV8 329 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 STX8Q9UNK0 236 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 TFCP2L1Q9NZI6 479 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 SBNO1A3KN83 1393 aa15.29■□□□□ 0.04
SMG9-201ENST00000270066 UBA7P41226 1012 aa15.28■□□□□ 0.04
SMG9-201ENST00000270066 ANAPC15P60006 121 aa15.28■□□□□ 0.04
SMG9-201ENST00000270066 FAM114A1Q8IWE2 563 aa15.28■□□□□ 0.04
SMG9-201ENST00000270066 PAG1Q9NWQ8 432 aa15.28■□□□□ 0.04
SMG9-201ENST00000270066 MAP3K19Q56UN5 1328 aa15.28■□□□□ 0.04
SMG9-201ENST00000270066 EYA3Q99504 573 aa15.28■□□□□ 0.04
SMG9-201ENST00000270066 MAGEB6P1A0A0J9YX57 407 aa15.28■□□□□ 0.04
SMG9-201ENST00000270066 SLC9C2Q5TAH2 1124 aa15.27■□□□□ 0.04
SMG9-201ENST00000270066 ERMNQ8TAM6 284 aa15.27■□□□□ 0.04
SMG9-201ENST00000270066 TNPO1Q92973 898 aaKnown RBP15.27■□□□□ 0.04
SMG9-201ENST00000270066 BTG4Q9NY30 223 aa15.27■□□□□ 0.04
SMG9-201ENST00000270066 ADGRL2O95490 1459 aa15.27■□□□□ 0.04
SMG9-201ENST00000270066 STX1AQ16623 288 aa15.27■□□□□ 0.04
SMG9-201ENST00000270066 ESYT1Q9BSJ8 1104 aa15.27■□□□□ 0.04
SMG9-201ENST00000270066 SLC4A8Q2Y0W8 1093 aa15.27■□□□□ 0.04
SMG9-201ENST00000270066 LARP6Q9BRS8 491 aaKnown RBP15.27■□□□□ 0.04
SMG9-201ENST00000270066 RTN1Q16799 776 aa15.27■□□□□ 0.03
SMG9-201ENST00000270066 BRF1Q92994 677 aa15.27■□□□□ 0.03
SMG9-201ENST00000270066 RBM8AQ9Y5S9 174 aaKnown RBP15.27■□□□□ 0.03
SMG9-201ENST00000270066 VAMP4O75379 141 aa15.27■□□□□ 0.03
SMG9-201ENST00000270066 ZC3H12CQ9C0D7 883 aaKnown RBP15.27■□□□□ 0.03
SMG9-201ENST00000270066 RBM25P49756 843 aaKnown RBP15.26■□□□□ 0.03
SMG9-201ENST00000270066 DHX37Q8IY37 1157 aaKnown RBP15.26■□□□□ 0.03
SMG9-201ENST00000270066 TBC1D32Q96NH3 1257 aa15.26■□□□□ 0.03
SMG9-201ENST00000270066 YEATS4O95619 227 aa15.26■□□□□ 0.03
SMG9-201ENST00000270066 TAF3Q5VWG9 929 aa15.26■□□□□ 0.03
SMG9-201ENST00000270066 CCDC191Q8NCU4 936 aa15.26■□□□□ 0.03
SMG9-201ENST00000270066 IQSEC3Q9UPP2 1182 aaPredicted RBP15.26■□□□□ 0.03
SMG9-201ENST00000270066 CEP170Q5SW79 1584 aa15.26■□□□□ 0.03
SMG9-201ENST00000270066 COL17A1Q9UMD9 1497 aaPredicted RBP15.25■□□□□ 0.03
SMG9-201ENST00000270066 SPDYE4A6NLX3 237 aa15.25■□□□□ 0.03
SMG9-201ENST00000270066 CALM1P0DP23 149 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms