RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 NLRP2Q9NX02 1062 aa19.93■□□□□ 0.78
SQLE-201ENST00000265896 H3BQV1 296 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 PPP4R3BQ5MIZ7 849 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 IFFO2Q5TF58 517 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 Q6ZUG5 572 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 PGBD1Q96JS3 809 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 BCL2L12Q9HB09 334 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 SH2B1Q9NRF2 756 aaPredicted RBP19.92■□□□□ 0.78
SQLE-201ENST00000265896 DBNLQ9UJU6 430 aaKnown RBP19.92■□□□□ 0.78
SQLE-201ENST00000265896 UBR1Q8IWV7 1749 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 SYTL4Q96C24 671 aaPredicted RBP19.92■□□□□ 0.78
SQLE-201ENST00000265896 RPS6KB1P23443 525 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 CABLES1Q8TDN4 633 aa19.92■□□□□ 0.78
SQLE-201ENST00000265896 LEO1Q8WVC0 666 aaPredicted RBP19.92■□□□□ 0.78
SQLE-201ENST00000265896 ZSCAN31Q96LW9 406 aaPredicted RBP19.92■□□□□ 0.78
SQLE-201ENST00000265896 TERF1P54274 439 aa19.91■□□□□ 0.78
SQLE-201ENST00000265896 HSP90AB3PQ58FF7 597 aa19.91■□□□□ 0.78
SQLE-201ENST00000265896 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
SQLE-201ENST00000265896 COL15A1P39059 1388 aa19.91■□□□□ 0.78
SQLE-201ENST00000265896 FMN2Q9NZ56 1722 aa19.91■□□□□ 0.78
SQLE-201ENST00000265896 LINS1Q8NG48 757 aa19.91■□□□□ 0.78
SQLE-201ENST00000265896 KIAA1524Q8TCG1 905 aa19.91■□□□□ 0.78
SQLE-201ENST00000265896 KIF3AQ9Y496 699 aa19.91■□□□□ 0.78
SQLE-201ENST00000265896 ATP2B3Q16720 1220 aa19.9■□□□□ 0.78
SQLE-201ENST00000265896 NALCNQ8IZF0 1738 aa19.9■□□□□ 0.78
SQLE-201ENST00000265896 LETM1O95202 739 aaPredicted RBP19.9■□□□□ 0.78
SQLE-201ENST00000265896 OTUD7BQ6GQQ9 843 aa19.9■□□□□ 0.78
SQLE-201ENST00000265896 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.9■□□□□ 0.78
SQLE-201ENST00000265896 V9GYY5 206 aaPredicted RBP19.9■□□□□ 0.78
SQLE-201ENST00000265896 TUBGCP6Q96RT7 1819 aa19.9■□□□□ 0.78
SQLE-201ENST00000265896 FAM200AQ8TCP9 573 aa19.89■□□□□ 0.78
SQLE-201ENST00000265896 IL17RAQ96F46 866 aa19.89■□□□□ 0.78
SQLE-201ENST00000265896 TAF5LO75529 589 aa19.89■□□□□ 0.77
SQLE-201ENST00000265896 TIMM10P62072 90 aa19.89■□□□□ 0.77
SQLE-201ENST00000265896 PDIA6Q15084 440 aa19.89■□□□□ 0.77
SQLE-201ENST00000265896 ZNF496Q96IT1 587 aaPredicted RBP19.89■□□□□ 0.77
SQLE-201ENST00000265896 GPHNQ9NQX3 736 aaPredicted RBP19.89■□□□□ 0.77
SQLE-201ENST00000265896 ERC1Q8IUD2 1116 aa19.89■□□□□ 0.77
SQLE-201ENST00000265896 TOPAZ1Q8N9V7 1692 aa19.88■□□□□ 0.77
SQLE-201ENST00000265896 U2AF2P26368 475 aaKnown RBP eCLIP19.88■□□□□ 0.77
SQLE-201ENST00000265896 PSMA5P28066 241 aa19.88■□□□□ 0.77
SQLE-201ENST00000265896 ZNF165P49910 485 aa19.88■□□□□ 0.77
SQLE-201ENST00000265896 APOBRQ0VD83 1088 aa19.88■□□□□ 0.77
SQLE-201ENST00000265896 CHRNA2Q15822 529 aa19.88■□□□□ 0.77
SQLE-201ENST00000265896 NPHP1O15259 732 aa19.88■□□□□ 0.77
SQLE-201ENST00000265896 CYP21A2P08686 494 aa19.88■□□□□ 0.77
SQLE-201ENST00000265896 MTX1Q13505 466 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 CCDC144BQ3MJ40 725 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 RNF20Q5VTR2 975 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 FILIP1Q7Z7B0 1213 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 CCDC144CPQ8IYA2 1237 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 GJB4Q9NTQ9 266 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 NEURL1BA8MQ27 555 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 GOLIM4O00461 696 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 ALDH1L1O75891 902 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 NEXNQ0ZGT2 675 aa19.87■□□□□ 0.77
SQLE-201ENST00000265896 NEK1Q96PY6 1258 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 TM6SF1Q9BZW5 370 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 SNRKQ9NRH2 765 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 DDX58O95786 925 aaKnown RBP19.86■□□□□ 0.77
SQLE-201ENST00000265896 CSB-PGBD3P0DP91 1061 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 GCKRQ14397 625 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 STOX1Q6ZVD7 989 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 ZNF594Q96JF6 807 aaPredicted RBP19.86■□□□□ 0.77
SQLE-201ENST00000265896 TRMT1Q9NXH9 659 aaKnown RBP19.86■□□□□ 0.77
SQLE-201ENST00000265896 USP42Q9H9J4 1324 aaKnown RBP19.86■□□□□ 0.77
SQLE-201ENST00000265896 HAND2P61296 217 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 BABAM1Q9NWV8 329 aa19.86■□□□□ 0.77
SQLE-201ENST00000265896 SCRN1Q12765 414 aa19.85■□□□□ 0.77
SQLE-201ENST00000265896 TTLL5Q6EMB2 1281 aa19.85■□□□□ 0.77
SQLE-201ENST00000265896 ISM2Q6H9L7 571 aa19.85■□□□□ 0.77
SQLE-201ENST00000265896 ZNF790Q6PG37 636 aa19.85■□□□□ 0.77
SQLE-201ENST00000265896 C11orf57Q6ZUT1 292 aaPredicted RBP19.85■□□□□ 0.77
SQLE-201ENST00000265896 DDX21Q9NR30 783 aaKnown RBP eCLIP19.85■□□□□ 0.77
SQLE-201ENST00000265896 A0A087WZG4 1122 aa19.85■□□□□ 0.77
SQLE-201ENST00000265896 FMNL2Q96PY5 1086 aa19.85■□□□□ 0.77
SQLE-201ENST00000265896 NPHP4O75161 1426 aaPredicted RBP19.84■□□□□ 0.77
SQLE-201ENST00000265896 PXDNLA1KZ92 1463 aa19.84■□□□□ 0.77
SQLE-201ENST00000265896 PTPN21Q16825 1174 aa19.84■□□□□ 0.77
SQLE-201ENST00000265896 CACTINQ8WUQ7 758 aaKnown RBP19.83■□□□□ 0.77
SQLE-201ENST00000265896 CLIP2Q9UDT6 1046 aa19.83■□□□□ 0.77
SQLE-201ENST00000265896 USP27XA6NNY8 438 aa19.83■□□□□ 0.77
SQLE-201ENST00000265896 CHAF1AQ13111 956 aaPredicted RBP19.83■□□□□ 0.77
SQLE-201ENST00000265896 TNNI3KQ59H18 835 aa19.83■□□□□ 0.77
SQLE-201ENST00000265896 LMBR1LQ6UX01 489 aa19.83■□□□□ 0.77
SQLE-201ENST00000265896 ANKRD13DQ6ZTN6 518 aa19.83■□□□□ 0.77
SQLE-201ENST00000265896 FPGT-TNNI3KV9GXZ4 949 aa19.83■□□□□ 0.77
SQLE-201ENST00000265896 SPTLC3Q9NUV7 552 aa19.83■□□□□ 0.76
SQLE-201ENST00000265896 PDCP20941 246 aa19.82■□□□□ 0.76
SQLE-201ENST00000265896 PTPN12Q05209 780 aaKnown RBP19.82■□□□□ 0.76
SQLE-201ENST00000265896 MAP7D2Q96T17 732 aa19.82■□□□□ 0.76
SQLE-201ENST00000265896 HOXB7P09629 217 aa19.82■□□□□ 0.76
SQLE-201ENST00000265896 PRIMPOLQ96LW4 560 aa19.82■□□□□ 0.76
SQLE-201ENST00000265896 CCDC94Q9BW85 323 aaPredicted RBP19.82■□□□□ 0.76
SQLE-201ENST00000265896 RGPD2P0DJD1 1756 aa19.81■□□□□ 0.76
SQLE-201ENST00000265896 ARHGEF25Q86VW2 580 aa19.81■□□□□ 0.76
SQLE-201ENST00000265896 GTF3C6Q969F1 213 aa19.81■□□□□ 0.76
SQLE-201ENST00000265896 SCAND2PQ9GZW5 306 aaPredicted RBP19.81■□□□□ 0.76
SQLE-201ENST00000265896 GOLPH3LQ9H4A5 285 aa19.81■□□□□ 0.76
SQLE-201ENST00000265896 BIN1O00499 593 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms