RNA–Protein interactions for RNA: ENST00000261897.5

PRPF40B-201, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-201ENST00000261897 SLC3A2P08195 630 aaKnown RBP18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 RHOXF2BP0C7M4 288 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 NCBP3Q53F19 620 aaKnown RBP18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 RHOXF2Q9BQY4 288 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 ZNF330Q9Y3S2 320 aaPredicted RBP18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 E2F4Q16254 413 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 GDAP1L1Q96MZ0 367 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 USP28Q96RU2 1077 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 CHPF2Q9P2E5 772 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 UBASH3AP57075 661 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 NOM1Q5C9Z4 860 aaKnown RBP18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 HINFPQ9BQA5 517 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 ZNF446Q9NWS9 450 aa18.5■□□□□ 0.55
PRPF40B-201ENST00000261897 A0A0D9SFI3 127 aa18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 DESI2Q9BSY9 194 aa18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 MED14O60244 1454 aa18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 DDX46Q7L014 1031 aaKnown RBP18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 ZNF396Q96N95 335 aaPredicted RBP18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 MYOM1P52179 1685 aa18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 HAND2P61296 217 aa18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 DPCR1Q3MIW9 517 aa18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 FEZ2Q9UHY8 353 aaPredicted RBP18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 CCDC61Q9Y6R9 512 aa18.49■□□□□ 0.55
PRPF40B-201ENST00000261897 CHGBP05060 677 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 WWC2Q6AWC2 1192 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 NEK1Q96PY6 1258 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 LAMC1P11047 1609 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 IQGAP1P46940 1657 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 NLRP6P59044 892 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 ABCA8O94911 1581 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 RPGRIP1LQ68CZ1 1315 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 KLHL10Q6JEL2 608 aa18.48■□□□□ 0.55
PRPF40B-201ENST00000261897 LRRC7Q96NW7 1537 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 PI4K2BQ8TCG2 481 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 TSPYL1Q9H0U9 437 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 ATP1A3P13637 1013 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 MYL6BP14649 208 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 AXDND1Q5T1B0 1012 aaPredicted RBP18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 DNAAF4Q8WXU2 420 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 IQGAP3Q86VI3 1631 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 FAM135BQ49AJ0 1406 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 ZSWIM6Q9HCJ5 1215 aa18.47■□□□□ 0.55
PRPF40B-201ENST00000261897 TRPM2O94759 1503 aa18.46■□□□□ 0.55
PRPF40B-201ENST00000261897 PIK3R4Q99570 1358 aa18.46■□□□□ 0.55
PRPF40B-201ENST00000261897 MYO1CO00159 1063 aa18.46■□□□□ 0.55
PRPF40B-201ENST00000261897 EVI5LQ96CN4 794 aa18.46■□□□□ 0.55
PRPF40B-201ENST00000261897 JAKMIP3Q5VZ66 844 aa18.46■□□□□ 0.55
PRPF40B-201ENST00000261897 SART3Q15020 963 aaKnown RBP18.46■□□□□ 0.54
PRPF40B-201ENST00000261897 KIF4BQ2VIQ3 1234 aa18.46■□□□□ 0.54
PRPF40B-201ENST00000261897 CYP2C19P33261 490 aa18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 PIP4K2AP48426 406 aaPredicted RBP18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 AKAP17AQ02040 695 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 OLFM4Q6UX06 510 aa18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 LCMT1Q9UIC8 334 aa18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 ADGRL1O94910 1474 aa18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 CCZ1BP86790 482 aa18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 CCZ1P86791 482 aaPredicted RBP18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 FKBP15Q5T1M5 1219 aa18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 DEF6Q9H4E7 631 aa18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 TLR7Q9NYK1 1049 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 YTHDC2Q9H6S0 1430 aaKnown RBP18.45■□□□□ 0.54
PRPF40B-201ENST00000261897 PTPDC1A2A3K4 754 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 ETF1P62495 437 aaKnown RBP18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 GJB4Q9NTQ9 266 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 STAP2Q9UGK3 403 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 RNF17Q9BXT8 1623 aaKnown RBP18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 RPS6KB1P23443 525 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 PLA2G4AP47712 749 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 E4F1Q66K89 784 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 CCDC82Q8N4S0 544 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 GOLPH3LQ9H4A5 285 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 ABCA6Q8N139 1617 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 GNAT3A8MTJ3 354 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 WASLO00401 505 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 PPP2R3AQ06190 1150 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 WASHC4Q2M389 1173 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 SLFNL1Q499Z3 407 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 RIC3Q7Z5B4 369 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 ZNF589Q86UQ0 364 aaPredicted RBP18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 CCDC150Q8NCX0 1101 aa18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 MRPS27Q92552 414 aaKnown RBP18.44■□□□□ 0.54
PRPF40B-201ENST00000261897 CTAGE5O15320 804 aa18.43■□□□□ 0.54
PRPF40B-201ENST00000261897 ADKP55263 362 aaKnown RBP18.43■□□□□ 0.54
PRPF40B-201ENST00000261897 MRFAP1L1Q96HT8 127 aa18.43■□□□□ 0.54
PRPF40B-201ENST00000261897 SYCP1Q15431 976 aa18.43■□□□□ 0.54
PRPF40B-201ENST00000261897 SPECC1Q5M775 1068 aa18.43■□□□□ 0.54
PRPF40B-201ENST00000261897 ST3GAL1Q11201 340 aa18.43■□□□□ 0.54
PRPF40B-201ENST00000261897 CDC42BPBQ9Y5S2 1711 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 FANCCQ00597 558 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 MAP3K2Q9Y2U5 619 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 FHOD1Q9Y613 1164 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 ARHGEF40Q8TER5 1519 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 MAP3K19Q56UN5 1328 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 FAM160A1Q05DH4 1040 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 LONRF3Q496Y0 759 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 DNAJC21Q5F1R6 531 aaKnown RBP18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 PDE11AQ9HCR9 933 aa18.42■□□□□ 0.54
PRPF40B-201ENST00000261897 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms