RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 PIK3C2AO00443 1686 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 TIMM10P62072 90 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 SLFNL1Q499Z3 407 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 TTC6Q86TZ1 520 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 MAP4K1Q92918 833 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 KAZALD1Q96I82 304 aa14.94□□□□□ -0.02
RAB3IP-201ENST00000247833 FAM177BA6PVY3 158 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 Q6ZUG5 572 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 METTL22Q9BUU2 404 aaPredicted RBP14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 DBNLQ9UJU6 430 aaKnown RBP14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 GOLGA6L6A8MZA4 724 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 LIG1P18858 919 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 RPS6KB1P23443 525 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 CHAF1AQ13111 956 aaPredicted RBP14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 NPHP3Q7Z494 1330 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 ZRSR1Q15695 479 aaKnown RBP14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 TNNI3KQ59H18 835 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 FPGT-TNNI3KV9GXZ4 949 aa14.93□□□□□ -0.02
RAB3IP-201ENST00000247833 TSC1Q92574 1164 aa14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 TM6SF1Q9BZW5 370 aa14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 ZNF500O60304 480 aaPredicted RBP14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 TOM1L2Q6ZVM7 507 aa14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 LUZP1Q86V48 1076 aa14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 RAB11FIP4Q86YS3 637 aa14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 PXDNLA1KZ92 1463 aa14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 PXDNQ92626 1479 aa14.92□□□□□ -0.02
RAB3IP-201ENST00000247833 MCM5P33992 734 aa14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 STRN4Q9NRL3 753 aa14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 UBE2Q2Q8WVN8 375 aa14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 ERBB3P21860 1342 aa14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 KRT32Q14532 448 aa14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 UVSSAQ2YD98 709 aa14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 ZNF594Q96JF6 807 aaPredicted RBP14.91□□□□□ -0.02
RAB3IP-201ENST00000247833 PHKG2P15735 406 aa14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 HAND2P61296 217 aa14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 SCAND2PQ9GZW5 306 aaPredicted RBP14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 GOLGA6L19H0YKK7 550 aa14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 NOLC1Q14978 699 aaKnown RBP eCLIP14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 SF3A1Q15459 793 aaKnown RBP14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 HSP90AB3PQ58FF7 597 aa14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 RGPD1P0DJD0 1748 aa14.9□□□□□ -0.02
RAB3IP-201ENST00000247833 ANO6Q4KMQ2 910 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 PRDM11Q9NQV5 511 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 BECN2A8MW95 431 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 TYRO3Q06418 890 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 TAF5LO75529 589 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 IFIT1P09914 478 aaKnown RBP14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 APOBRQ0VD83 1088 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 MCMDC2Q4G0Z9 681 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 HMG20BQ9P0W2 317 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 FMN2Q9NZ56 1722 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 TCHHQ07283 1943 aa14.89□□□□□ -0.03
RAB3IP-201ENST00000247833 PDIA6Q15084 440 aa14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 NCOA5Q9HCD5 579 aaKnown RBP14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 U3KPZ7 1027 aaPredicted RBP14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 KAT6BQ8WYB5 2073 aa14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 A1BGP04217 495 aa14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 TOPAZ1Q8N9V7 1692 aa14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 ME1P48163 572 aa14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 PTPN12Q05209 780 aaKnown RBP14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 ZNF592Q92610 1267 aa14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 DNAJC25Q9H1X3 360 aa14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 USP42Q9H9J4 1324 aaKnown RBP14.88□□□□□ -0.03
RAB3IP-201ENST00000247833 ST3GAL1Q11201 340 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 CCDC73Q6ZRK6 1079 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 TTLL7Q6ZT98 887 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 ARHGAP23Q9P227 1491 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 TMEM87AQ8NBN3 555 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 C19orf44Q9H6X5 657 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 KIF3AQ9Y496 699 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 APPP05067 770 aa14.87□□□□□ -0.03
RAB3IP-201ENST00000247833 TOB2Q14106 344 aaPredicted RBP14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 NALCNQ8IZF0 1738 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 FAM200AQ8TCP9 573 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 LEO1Q8WVC0 666 aaPredicted RBP14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 DCAF5Q96JK2 942 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 CEP126Q9P2H0 1117 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 SLIT1O75093 1534 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 CYP21A2P08686 494 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 ATP5JP18859 108 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 ZNF165P49910 485 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 EVA1CP58658 441 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 PDCL3Q9H2J4 239 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 CPLX1O14810 134 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 PTGS1P23219 599 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 PAG1Q9NWQ8 432 aa14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 CWC25Q9NXE8 425 aaPredicted RBP14.86□□□□□ -0.03
RAB3IP-201ENST00000247833 NWD1Q149M9 1564 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 CYP27B1O15528 508 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 CCDC57Q2TAC2 916 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 TTC39AQ5SRH9 613 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 SDF4Q9BRK5 362 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 FTOQ9C0B1 505 aaKnown RBP eCLIP14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 A0A087WWV3 80 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 NR1I2O75469 434 aa14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 GNL2Q13823 731 aaKnown RBP14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 ERCC4Q92889 916 aaPredicted RBP14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 SYTL4Q96C24 671 aaPredicted RBP14.85□□□□□ -0.03
RAB3IP-201ENST00000247833 COPRSQ9NQ92 184 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms