RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 SNRPA1P09661 255 aaKnown RBP20.06■□□□□ 0.8
SSPN-201ENST00000242729 ATF3P18847 181 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 LIG1P18858 919 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 TTLL7Q6ZT98 887 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 CHST3Q7LGC8 479 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 EPB41L2O43491 1005 aaKnown RBP20.06■□□□□ 0.8
SSPN-201ENST00000242729 TAF5LO75529 589 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 FGD1P98174 961 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 FAM13BQ9NYF5 915 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 AP5Z1O43299 807 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 HDAC5Q9UQL6 1122 aa20.06■□□□□ 0.8
SSPN-201ENST00000242729 A1BGP04217 495 aa20.05■□□□□ 0.8
SSPN-201ENST00000242729 RPS6KB1P23443 525 aa20.05■□□□□ 0.8
SSPN-201ENST00000242729 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
SSPN-201ENST00000242729 SH2B1Q9NRF2 756 aaPredicted RBP20.05■□□□□ 0.8
SSPN-201ENST00000242729 ATP6V1DQ9Y5K8 247 aa20.05■□□□□ 0.8
SSPN-201ENST00000242729 UTYO14607 1347 aa20.05■□□□□ 0.8
SSPN-201ENST00000242729 GOLIM4O00461 696 aa20.05■□□□□ 0.8
SSPN-201ENST00000242729 ZSCAN31Q96LW9 406 aaPredicted RBP20.05■□□□□ 0.8
SSPN-201ENST00000242729 TM6SF1Q9BZW5 370 aa20.04■□□□□ 0.8
SSPN-201ENST00000242729 C19orf44Q9H6X5 657 aa20.04■□□□□ 0.8
SSPN-201ENST00000242729 RFX5P48382 616 aaPredicted RBP20.04■□□□□ 0.8
SSPN-201ENST00000242729 RNF20Q5VTR2 975 aa20.04■□□□□ 0.8
SSPN-201ENST00000242729 TMEM87AQ8NBN3 555 aa20.04■□□□□ 0.8
SSPN-201ENST00000242729 NCAPD2Q15021 1401 aa20.04■□□□□ 0.8
SSPN-201ENST00000242729 PSMA5P28066 241 aa20.03■□□□□ 0.8
SSPN-201ENST00000242729 Q6ZUG5 572 aa20.03■□□□□ 0.8
SSPN-201ENST00000242729 TSC1Q92574 1164 aa20.03■□□□□ 0.8
SSPN-201ENST00000242729 FMNL2Q96PY5 1086 aa20.03■□□□□ 0.8
SSPN-201ENST00000242729 HSP90AB3PQ58FF7 597 aa20.03■□□□□ 0.8
SSPN-201ENST00000242729 LRP10Q7Z4F1 713 aa20.03■□□□□ 0.8
SSPN-201ENST00000242729 C1orf167Q5SNV9 1468 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 FAM177BA6PVY3 158 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 BRF1Q92994 677 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 USP54Q70EL1 1684 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 NBPF26B4DH59 902 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 HIP1O00291 1037 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 ZNF500O60304 480 aaPredicted RBP20.02■□□□□ 0.8
SSPN-201ENST00000242729 CYP21A2P08686 494 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 HS1BP3Q53T59 392 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 NBPF14Q5TI25 921 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 NBPF10Q6P3W6 841 aaKnown RBP20.02■□□□□ 0.8
SSPN-201ENST00000242729 NBPF15Q8N660 670 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 SNRKQ9NRH2 765 aa20.02■□□□□ 0.8
SSPN-201ENST00000242729 UQCRHLA0A096LP55 91 aa20.01■□□□□ 0.79
SSPN-201ENST00000242729 UQCRHP07919 91 aa20.01■□□□□ 0.79
SSPN-201ENST00000242729 LRRC24Q50LG9 513 aa20.01■□□□□ 0.79
SSPN-201ENST00000242729 FTOQ9C0B1 505 aaKnown RBP eCLIP20.01■□□□□ 0.79
SSPN-201ENST00000242729 CCT2P78371 535 aaKnown RBP20.01■□□□□ 0.79
SSPN-201ENST00000242729 KCNB2Q92953 911 aa20.01■□□□□ 0.79
SSPN-201ENST00000242729 GOLGA6L4A6NEF3 574 aa20■□□□□ 0.79
SSPN-201ENST00000242729 GUCY1B3Q02153 619 aa20■□□□□ 0.79
SSPN-201ENST00000242729 DACT1Q9NYF0 836 aa20■□□□□ 0.79
SSPN-201ENST00000242729 A0A087WWV3 80 aa20■□□□□ 0.79
SSPN-201ENST00000242729 KRT85P78386 507 aa20■□□□□ 0.79
SSPN-201ENST00000242729 NEK1Q96PY6 1258 aa20■□□□□ 0.79
SSPN-201ENST00000242729 ZNF609O15014 1411 aa20■□□□□ 0.79
SSPN-201ENST00000242729 MED23Q9ULK4 1368 aa20■□□□□ 0.79
SSPN-201ENST00000242729 LUZP1Q86V48 1076 aa20■□□□□ 0.79
SSPN-201ENST00000242729 RAB11FIP4Q86YS3 637 aa20■□□□□ 0.79
SSPN-201ENST00000242729 DCAF5Q96JK2 942 aa20■□□□□ 0.79
SSPN-201ENST00000242729 PUS3Q9BZE2 481 aaKnown RBP20■□□□□ 0.79
SSPN-201ENST00000242729 NCOA5Q9HCD5 579 aaKnown RBP20■□□□□ 0.79
SSPN-201ENST00000242729 COPRSQ9NQ92 184 aa20■□□□□ 0.79
SSPN-201ENST00000242729 STOX1Q6ZVD7 989 aa19.99■□□□□ 0.79
SSPN-201ENST00000242729 SPATA32Q96LK8 384 aa19.99■□□□□ 0.79
SSPN-201ENST00000242729 C5P01031 1676 aa19.99■□□□□ 0.79
SSPN-201ENST00000242729 ATP5JP18859 108 aa19.99■□□□□ 0.79
SSPN-201ENST00000242729 FBXW7Q969H0 707 aa19.99■□□□□ 0.79
SSPN-201ENST00000242729 SLIT3O75094 1523 aa19.98■□□□□ 0.79
SSPN-201ENST00000242729 TMEM94Q12767 1356 aa19.98■□□□□ 0.79
SSPN-201ENST00000242729 KDM4AO75164 1064 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 TPM2P07951 284 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 HSPA2P54652 639 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 APOBRQ0VD83 1088 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 KIAA2012Q0VF49 1180 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 TTLL5Q6EMB2 1281 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 TOM1L2Q6ZVM7 507 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 BICD2Q8TD16 824 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 STRN4Q9NRL3 753 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 H3BQV1 296 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 FKBP4Q02790 459 aaKnown RBP eCLIP19.97■□□□□ 0.79
SSPN-201ENST00000242729 IFFO2Q5TF58 517 aa19.97■□□□□ 0.79
SSPN-201ENST00000242729 GPHNQ9NQX3 736 aaPredicted RBP19.96■□□□□ 0.79
SSPN-201ENST00000242729 NR1I2O75469 434 aa19.96■□□□□ 0.79
SSPN-201ENST00000242729 HAND2P61296 217 aa19.96■□□□□ 0.79
SSPN-201ENST00000242729 FUCA2Q9BTY2 467 aa19.96■□□□□ 0.79
SSPN-201ENST00000242729 BCL11BQ9C0K0 894 aaPredicted RBP19.96■□□□□ 0.79
SSPN-201ENST00000242729 CRYBG1Q9Y4K1 1723 aa19.96■□□□□ 0.79
SSPN-201ENST00000242729 MCMDC2Q4G0Z9 681 aa19.95■□□□□ 0.78
SSPN-201ENST00000242729 ERCC4Q92889 916 aaPredicted RBP19.95■□□□□ 0.78
SSPN-201ENST00000242729 NUP62CLQ9H1M0 184 aa19.95■□□□□ 0.78
SSPN-201ENST00000242729 SCRN1Q12765 414 aa19.95■□□□□ 0.78
SSPN-201ENST00000242729 FAM184AQ8NB25 1140 aa19.95■□□□□ 0.78
SSPN-201ENST00000242729 FOXO4P98177 505 aa19.95■□□□□ 0.78
SSPN-201ENST00000242729 TNMDQ9H2S6 317 aa19.95■□□□□ 0.78
SSPN-201ENST00000242729 CSPP1Q1MSJ5 1256 aa19.94■□□□□ 0.78
SSPN-201ENST00000242729 ATG9AQ7Z3C6 839 aa19.94■□□□□ 0.78
SSPN-201ENST00000242729 SYNE4Q8N205 404 aa19.94■□□□□ 0.78
SSPN-201ENST00000242729 PLBD2Q8NHP8 589 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms