RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
IFT43-201ENST00000238628 RPGRQ92834 1020 aaKnown RBP11.16□□□□□ -0.62
IFT43-201ENST00000238628 TMX4Q9H1E5 349 aaPredicted RBP11.16□□□□□ -0.62
IFT43-201ENST00000238628 TRIM17Q9Y577 477 aa11.16□□□□□ -0.62
IFT43-201ENST00000238628 SZT2Q5T011 3432 aa11.15□□□□□ -0.62
IFT43-201ENST00000238628 KIF7Q2M1P5 1343 aa11.15□□□□□ -0.62
IFT43-201ENST00000238628 PIP4K2AP48426 406 aaPredicted RBP11.15□□□□□ -0.62
IFT43-201ENST00000238628 SAMD7Q7Z3H4 446 aa11.15□□□□□ -0.62
IFT43-201ENST00000238628 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
IFT43-201ENST00000238628 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
IFT43-201ENST00000238628 MKI67P46013 3256 aaKnown RBP11.15□□□□□ -0.62
IFT43-201ENST00000238628 POLR2AP24928 1970 aaKnown RBP11.14□□□□□ -0.63
IFT43-201ENST00000238628 A0A0C4DFX4 3053 aa11.14□□□□□ -0.63
IFT43-201ENST00000238628 PAPPA2Q9BXP8 1791 aa11.14□□□□□ -0.63
IFT43-201ENST00000238628 PPEF1O14829 653 aaPredicted RBP11.14□□□□□ -0.63
IFT43-201ENST00000238628 TBC1D10BQ4KMP7 808 aaPredicted RBP11.14□□□□□ -0.63
IFT43-201ENST00000238628 RBM26Q5T8P6 1007 aaKnown RBP11.14□□□□□ -0.63
IFT43-201ENST00000238628 TMEM106CQ9BVX2 250 aa11.14□□□□□ -0.63
IFT43-201ENST00000238628 PRAMEF22A3QJZ6 481 aa11.13□□□□□ -0.63
IFT43-201ENST00000238628 CRY2Q49AN0 593 aa11.13□□□□□ -0.63
IFT43-201ENST00000238628 SLC51AQ86UW1 340 aa11.13□□□□□ -0.63
IFT43-201ENST00000238628 SULF1Q8IWU6 871 aa11.13□□□□□ -0.63
IFT43-201ENST00000238628 SUPT20HQ8NEM7 779 aa11.13□□□□□ -0.63
IFT43-201ENST00000238628 PHACTR3Q96KR7 559 aa11.13□□□□□ -0.63
IFT43-201ENST00000238628 CEMIPQ8WUJ3 1361 aa11.13□□□□□ -0.63
IFT43-201ENST00000238628 SNRPA1P09661 255 aaKnown RBP11.12□□□□□ -0.63
IFT43-201ENST00000238628 PRKAR2BP31323 418 aa11.12□□□□□ -0.63
IFT43-201ENST00000238628 TM4SF4P48230 202 aa11.12□□□□□ -0.63
IFT43-201ENST00000238628 RBM17Q96I25 401 aaKnown RBP11.12□□□□□ -0.63
IFT43-201ENST00000238628 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
IFT43-201ENST00000238628 HOXA10P31260 410 aaPredicted RBP11.11□□□□□ -0.63
IFT43-201ENST00000238628 OTOP1Q7RTM1 612 aa11.11□□□□□ -0.63
IFT43-201ENST00000238628 CCER1Q8TC90 406 aaPredicted RBP11.11□□□□□ -0.63
IFT43-201ENST00000238628 RTF1Q92541 710 aaKnown RBP11.11□□□□□ -0.63
IFT43-201ENST00000238628 CDCA5Q96FF9 252 aa11.11□□□□□ -0.63
IFT43-201ENST00000238628 COL25A1Q9BXS0 654 aaPredicted RBP11.11□□□□□ -0.63
IFT43-201ENST00000238628 R3HDMLQ9H3Y0 253 aa11.11□□□□□ -0.63
IFT43-201ENST00000238628 COL3A1P02461 1466 aaPredicted RBP11.11□□□□□ -0.63
IFT43-201ENST00000238628 NBPF26B4DH59 902 aa11.1□□□□□ -0.63
IFT43-201ENST00000238628 NBPF10Q6P3W6 841 aaKnown RBP11.1□□□□□ -0.63
IFT43-201ENST00000238628 MCM10Q7L590 875 aa11.1□□□□□ -0.63
IFT43-201ENST00000238628 NUTM1Q86Y26 1132 aa11.1□□□□□ -0.63
IFT43-201ENST00000238628 DPF2Q92785 391 aa11.1□□□□□ -0.63
IFT43-201ENST00000238628 CFAP53Q96M91 514 aa11.1□□□□□ -0.63
IFT43-201ENST00000238628 CRAMP1Q96RY5 1269 aa11.1□□□□□ -0.63
IFT43-201ENST00000238628 RBBP6Q7Z6E9 1792 aaKnown RBP11.09□□□□□ -0.63
IFT43-201ENST00000238628 RGL2O15211 777 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 EGFRP00533 1210 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 FKBP1BP68106 108 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 SREBF2Q12772 1141 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 MKRN3Q13064 507 aaKnown RBP11.09□□□□□ -0.63
IFT43-201ENST00000238628 HLFQ16534 295 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 DPF3Q92784 378 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 ARMC5Q96C12 935 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 NYXQ9GZU5 481 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 RSPH6AQ9H0K4 717 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 PTPN22Q9Y2R2 807 aa11.09□□□□□ -0.63
IFT43-201ENST00000238628 ABCC12Q96J65 1359 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 UBE2Q2LH0YL09 131 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 KIAA2012Q0VF49 1180 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 SLC4A8Q2Y0W8 1093 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 DPP8Q6V1X1 898 aaPredicted RBP11.08□□□□□ -0.64
IFT43-201ENST00000238628 PPP4R3CPQ6ZMV5 832 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 NGEFQ8N5V2 710 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 CFHR5Q9BXR6 569 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 RTFDC1Q9BY42 306 aaPredicted RBP11.08□□□□□ -0.64
IFT43-201ENST00000238628 GGA3Q9NZ52 723 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 ATP6V0A2Q9Y487 856 aa11.08□□□□□ -0.64
IFT43-201ENST00000238628 NUP98P52948 1817 aa11.07□□□□□ -0.64
IFT43-201ENST00000238628 YDJCA8MPS7 323 aa11.07□□□□□ -0.64
IFT43-201ENST00000238628 U2AF1L5P0DN76 240 aaPredicted RBP11.07□□□□□ -0.64
IFT43-201ENST00000238628 U2AF1Q01081 240 aaKnown RBP eCLIP11.07□□□□□ -0.64
IFT43-201ENST00000238628 DCTN1Q14203 1278 aa11.07□□□□□ -0.64
IFT43-201ENST00000238628 MOB2Q70IA6 237 aa11.07□□□□□ -0.64
IFT43-201ENST00000238628 MPNDQ8N594 471 aa11.07□□□□□ -0.64
IFT43-201ENST00000238628 PSMD14O00487 310 aa11.06□□□□□ -0.64
IFT43-201ENST00000238628 HTATSF1O43719 755 aaKnown RBP11.06□□□□□ -0.64
IFT43-201ENST00000238628 ALDH1A1P00352 501 aa11.06□□□□□ -0.64
IFT43-201ENST00000238628 TTLL12Q14166 644 aaPredicted RBP11.06□□□□□ -0.64
IFT43-201ENST00000238628 TAF7Q15545 349 aaPredicted RBP11.06□□□□□ -0.64
IFT43-201ENST00000238628 KIF4BQ2VIQ3 1234 aa11.06□□□□□ -0.64
IFT43-201ENST00000238628 RNF216Q9NWF9 866 aaPredicted RBP11.06□□□□□ -0.64
IFT43-201ENST00000238628 MIS18AQ9NYP9 233 aa11.06□□□□□ -0.64
IFT43-201ENST00000238628 COL6A3P12111 3177 aa11.06□□□□□ -0.64
IFT43-201ENST00000238628 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
IFT43-201ENST00000238628 ERO1AQ96HE7 468 aa11.05□□□□□ -0.64
IFT43-201ENST00000238628 LRCH3Q96II8 777 aa11.05□□□□□ -0.64
IFT43-201ENST00000238628 ASTN2O75129 1339 aaPredicted RBP11.05□□□□□ -0.64
IFT43-201ENST00000238628 RIC1Q4ADV7 1423 aa11.04□□□□□ -0.64
IFT43-201ENST00000238628 SOX1O00570 391 aaPredicted RBP11.04□□□□□ -0.64
IFT43-201ENST00000238628 RPS12P25398 132 aaKnown RBP11.04□□□□□ -0.64
IFT43-201ENST00000238628 ANKRD13DQ6ZTN6 518 aa11.04□□□□□ -0.64
IFT43-201ENST00000238628 NBPF11Q86T75 865 aa11.04□□□□□ -0.64
IFT43-201ENST00000238628 ZNF333Q96JL9 665 aa11.04□□□□□ -0.64
IFT43-201ENST00000238628 EFCC1Q9HA90 598 aa11.04□□□□□ -0.64
IFT43-201ENST00000238628 RRP7AQ9Y3A4 280 aaKnown RBP11.04□□□□□ -0.64
IFT43-201ENST00000238628 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
IFT43-201ENST00000238628 TCIRG1Q13488 830 aa11.03□□□□□ -0.64
IFT43-201ENST00000238628 ANGEL2Q5VTE6 544 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms