RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
SFXN3-201ENST00000224807 CCDC171Q6TFL3 1326 aa16.86■□□□□ 0.29
SFXN3-201ENST00000224807 SSH3Q8TE77 659 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 CCDC34Q96HJ3 373 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 ZSCAN31Q96LW9 406 aaPredicted RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 SH2B1Q9NRF2 756 aaPredicted RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 PAXBP1Q9Y5B6 917 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 GNAT3A8MTJ3 354 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 KINO60870 393 aaKnown RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 GYS2P54840 703 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 LMOD2Q6P5Q4 547 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 CCDC73Q6ZRK6 1079 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 CLSTN2Q9H4D0 955 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 ZCCHC17Q9NP64 241 aaKnown RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 SEC31AO94979 1220 aaKnown RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 IRX5P78411 483 aaPredicted RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 SF3A1Q15459 793 aaKnown RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 ITSN1Q15811 1721 aa16.85■□□□□ 0.29
SFXN3-201ENST00000224807 ZNF397Q8NF99 534 aaPredicted RBP16.85■□□□□ 0.29
SFXN3-201ENST00000224807 A0A1B0GVL5 298 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 ARHGAP29Q52LW3 1261 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 GPATCH3Q96I76 525 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 ESF1Q9H501 851 aaKnown RBP16.84■□□□□ 0.29
SFXN3-201ENST00000224807 ZSWIM6Q9HCJ5 1215 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 DDX19AQ9NUU7 478 aaKnown RBP16.84■□□□□ 0.29
SFXN3-201ENST00000224807 PEAK1Q9H792 1746 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 PDCP20941 246 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 NOL10Q9BSC4 688 aaKnown RBP16.84■□□□□ 0.29
SFXN3-201ENST00000224807 LGR6Q9HBX8 967 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 NPHP3Q7Z494 1330 aa16.84■□□□□ 0.29
SFXN3-201ENST00000224807 RGPD1P0DJD0 1748 aa16.83■□□□□ 0.29
SFXN3-201ENST00000224807 PRAMEF22A3QJZ6 481 aa16.83■□□□□ 0.29
SFXN3-201ENST00000224807 POLR3DP05423 398 aaPredicted RBP16.83■□□□□ 0.29
SFXN3-201ENST00000224807 SNW1Q13573 536 aaKnown RBP16.83■□□□□ 0.29
SFXN3-201ENST00000224807 DNAAF4Q8WXU2 420 aa16.83■□□□□ 0.29
SFXN3-201ENST00000224807 TRIM34Q9BYJ4 488 aa16.83■□□□□ 0.29
SFXN3-201ENST00000224807 DNAI1Q9UI46 699 aa16.83■□□□□ 0.29
SFXN3-201ENST00000224807 NRXN3Q9Y4C0 1643 aa16.83■□□□□ 0.29
SFXN3-201ENST00000224807 RBM6P78332 1123 aaKnown RBP16.83■□□□□ 0.28
SFXN3-201ENST00000224807 MPRIPQ6WCQ1 1025 aa16.83■□□□□ 0.28
SFXN3-201ENST00000224807 FSIP1Q8NA03 581 aa16.83■□□□□ 0.28
SFXN3-201ENST00000224807 URI1O94763 535 aaPredicted RBP16.83■□□□□ 0.28
SFXN3-201ENST00000224807 LMOD1P29536 600 aaPredicted RBP16.83■□□□□ 0.28
SFXN3-201ENST00000224807 G3BP1Q13283 466 aaKnown RBP eCLIP16.83■□□□□ 0.28
SFXN3-201ENST00000224807 Q6ZUG5 572 aa16.83■□□□□ 0.28
SFXN3-201ENST00000224807 PLA2G4DQ86XP0 818 aa16.83■□□□□ 0.28
SFXN3-201ENST00000224807 RIMS1Q86UR5 1692 aaKnown RBP16.83■□□□□ 0.28
SFXN3-201ENST00000224807 CCDC66A2RUB6 948 aa16.82■□□□□ 0.28
SFXN3-201ENST00000224807 TIGD1Q96MW7 591 aa16.82■□□□□ 0.28
SFXN3-201ENST00000224807 IFNKQ9P0W0 207 aa16.82■□□□□ 0.28
SFXN3-201ENST00000224807 SLU7O95391 586 aaKnown RBP16.81■□□□□ 0.28
SFXN3-201ENST00000224807 EAF2Q96CJ1 260 aaPredicted RBP16.81■□□□□ 0.28
SFXN3-201ENST00000224807 MAP3K2Q9Y2U5 619 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 OVOS2A0A0J9YW53 1432 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 OVOS2Q6IE36 1432 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 PSMA5P28066 241 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 TNNT3P45378 269 aaPredicted RBP16.81■□□□□ 0.28
SFXN3-201ENST00000224807 GJB4Q9NTQ9 266 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 ARHGEF10O15013 1369 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 MYL6BP14649 208 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 MNS1Q8NEH6 495 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 GOLPH3LQ9H4A5 285 aa16.81■□□□□ 0.28
SFXN3-201ENST00000224807 XRN1Q8IZH2 1706 aaKnown RBP16.8■□□□□ 0.28
SFXN3-201ENST00000224807 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
SFXN3-201ENST00000224807 RNF20Q5VTR2 975 aa16.8■□□□□ 0.28
SFXN3-201ENST00000224807 DDX46Q7L014 1031 aaKnown RBP16.8■□□□□ 0.28
SFXN3-201ENST00000224807 AOX1Q06278 1338 aa16.8■□□□□ 0.28
SFXN3-201ENST00000224807 APOBRQ0VD83 1088 aa16.8■□□□□ 0.28
SFXN3-201ENST00000224807 NECTIN1Q15223 517 aa16.8■□□□□ 0.28
SFXN3-201ENST00000224807 TDRD7Q8NHU6 1098 aaKnown RBP16.8■□□□□ 0.28
SFXN3-201ENST00000224807 USP28Q96RU2 1077 aa16.79■□□□□ 0.28
SFXN3-201ENST00000224807 EPB41L2O43491 1005 aaKnown RBP16.79■□□□□ 0.28
SFXN3-201ENST00000224807 GABPB1Q06547 395 aaPredicted RBP16.79■□□□□ 0.28
SFXN3-201ENST00000224807 TOB2Q14106 344 aaPredicted RBP16.79■□□□□ 0.28
SFXN3-201ENST00000224807 PDILTQ8N807 584 aa16.79■□□□□ 0.28
SFXN3-201ENST00000224807 ZNF446Q9NWS9 450 aa16.78■□□□□ 0.28
SFXN3-201ENST00000224807 RPS6KB1P23443 525 aa16.78■□□□□ 0.28
SFXN3-201ENST00000224807 HNRNPH2P55795 449 aaKnown RBP16.78■□□□□ 0.28
SFXN3-201ENST00000224807 TEX35Q5T0J7 233 aa16.78■□□□□ 0.28
SFXN3-201ENST00000224807 TTLL5Q6EMB2 1281 aa16.78■□□□□ 0.28
SFXN3-201ENST00000224807 UBXN4Q92575 508 aa16.78■□□□□ 0.28
SFXN3-201ENST00000224807 XPO4Q9C0E2 1151 aaKnown RBP16.78■□□□□ 0.28
SFXN3-201ENST00000224807 MORC2Q9Y6X9 1032 aaPredicted RBP16.78■□□□□ 0.28
SFXN3-201ENST00000224807 SFPQP23246 707 aaKnown RBP eCLIP16.77■□□□□ 0.28
SFXN3-201ENST00000224807 CLCN6P51797 869 aa16.77■□□□□ 0.28
SFXN3-201ENST00000224807 STX1AQ16623 288 aa16.77■□□□□ 0.28
SFXN3-201ENST00000224807 CEP57L1Q8IYX8 460 aa16.77■□□□□ 0.28
SFXN3-201ENST00000224807 EVI5LQ96CN4 794 aa16.77■□□□□ 0.28
SFXN3-201ENST00000224807 FAM208AQ9UK61 1670 aaKnown RBP16.77■□□□□ 0.28
SFXN3-201ENST00000224807 SPATA31D1Q6ZQQ2 1576 aa16.77■□□□□ 0.28
SFXN3-201ENST00000224807 A0A0G2JLW4 131 aa16.77■□□□□ 0.27
SFXN3-201ENST00000224807 DPCR1Q3MIW9 517 aa16.76■□□□□ 0.27
SFXN3-201ENST00000224807 NEUROD6Q96NK8 337 aa16.76■□□□□ 0.27
SFXN3-201ENST00000224807 CARD6Q9BX69 1037 aa16.76■□□□□ 0.27
SFXN3-201ENST00000224807 ERO1AQ96HE7 468 aa16.76■□□□□ 0.27
SFXN3-201ENST00000224807 NEK1Q96PY6 1258 aa16.76■□□□□ 0.27
SFXN3-201ENST00000224807 GPHNQ9NQX3 736 aaPredicted RBP16.76■□□□□ 0.27
SFXN3-201ENST00000224807 MARCKSP29966 332 aaPredicted RBP16.75■□□□□ 0.27
SFXN3-201ENST00000224807 HAND2P61296 217 aa16.75■□□□□ 0.27
SFXN3-201ENST00000224807 CCZ1BP86790 482 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms