RNA–Protein interactions for RNA: ENST00000220509.9

VPS18-201, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS18, Length 3,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-201ENST00000220509 PNMA6EA0A0J9YXQ4 647 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 NRDCO43847 1150 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 ZNF853P0CG23 659 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 TMX3Q96JJ7 454 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 BTG4Q9NY30 223 aa12.4□□□□□ -0.42
VPS18-201ENST00000220509 CAMK4Q16566 473 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 NFXL1Q6ZNB6 911 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 NCAPGQ9BPX3 1015 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 WDR33Q9C0J8 1336 aaKnown RBP12.39□□□□□ -0.43
VPS18-201ENST00000220509 LARP1BQ659C4 914 aaKnown RBP12.39□□□□□ -0.43
VPS18-201ENST00000220509 CC2D2BQ6DHV5 1058 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 CPLX2Q6PUV4 134 aaKnown RBP12.39□□□□□ -0.43
VPS18-201ENST00000220509 KIAA0232Q92628 1395 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 ATP2B3Q16720 1220 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 HS1BP3Q53T59 392 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 CCDC158Q5M9N0 1113 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 TTC39AQ5SRH9 613 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 STK11IPQ8N1F8 1099 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 ARHGEF10O15013 1369 aa12.39□□□□□ -0.43
VPS18-201ENST00000220509 MAFGO15525 162 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 GSPT1P15170 499 aaKnown RBP12.38□□□□□ -0.43
VPS18-201ENST00000220509 CALRP27797 417 aaKnown RBP12.38□□□□□ -0.43
VPS18-201ENST00000220509 DNAJC21Q5F1R6 531 aaKnown RBP12.38□□□□□ -0.43
VPS18-201ENST00000220509 BRINP3Q76B58 766 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 TMTC2Q8N394 836 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 CDC42BPGQ6DT37 1551 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 C3P01024 1663 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 ADGRL3Q9HAR2 1447 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 BECN2A8MW95 431 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 CAPN2P17655 700 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 KSR2Q6VAB6 950 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 NBPF5PQ86XG9 351 aaPredicted RBP12.38□□□□□ -0.43
VPS18-201ENST00000220509 MYRIPQ8NFW9 859 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 ZCRB1Q8TBF4 217 aaKnown RBP12.38□□□□□ -0.43
VPS18-201ENST00000220509 ESYT1Q9BSJ8 1104 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 TMOD3Q9NYL9 352 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 UBR1Q8IWV7 1749 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 ABCC4O15439 1325 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 GRM8O00222 908 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 SNRPA1P09661 255 aaKnown RBP12.38□□□□□ -0.43
VPS18-201ENST00000220509 GPTP24298 496 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 FAM212AQ96EL1 285 aa12.38□□□□□ -0.43
VPS18-201ENST00000220509 NBPF7P0C2Y1 421 aaPredicted RBP12.37□□□□□ -0.43
VPS18-201ENST00000220509 MCM5P33992 734 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 SYNE3Q6ZMZ3 975 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 USP48Q86UV5 1035 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 TCEANC2Q96MN5 208 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 BCL2L12Q9HB09 334 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 PTCH1Q13635 1447 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 DIP2AQ14689 1571 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 DDX11Q96FC9 970 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 SGSM3Q96HU1 749 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 GOLGA6L19H0YKK7 550 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 USP26Q9BXU7 913 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.37□□□□□ -0.43
VPS18-201ENST00000220509 PDCP20941 246 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 TRIM5Q9C035 493 aa12.37□□□□□ -0.43
VPS18-201ENST00000220509 OVOS2A0A0J9YW53 1432 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 OVOS2Q6IE36 1432 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 LRCH2Q5VUJ6 765 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 CNPY2Q9Y2B0 182 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 RIOK3O14730 519 aaKnown RBP12.36□□□□□ -0.43
VPS18-201ENST00000220509 TPD52L1Q16890 204 aaPredicted RBP12.36□□□□□ -0.43
VPS18-201ENST00000220509 ACSBG1Q96GR2 724 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 MED14O60244 1454 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 ERBB3P21860 1342 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 AK9Q5TCS8 1911 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 EIF4A1P60842 406 aaKnown RBP12.36□□□□□ -0.43
VPS18-201ENST00000220509 PROSER3Q2NL68 480 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 SNRKQ9NRH2 765 aa12.36□□□□□ -0.43
VPS18-201ENST00000220509 RBM28Q9NW13 759 aaKnown RBP12.36□□□□□ -0.43
VPS18-201ENST00000220509 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 PPFIA3O75145 1194 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
VPS18-201ENST00000220509 LINS1Q8NG48 757 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 ZNF496Q96IT1 587 aaPredicted RBP12.35□□□□□ -0.43
VPS18-201ENST00000220509 ZNF790Q6PG37 636 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 CREBRFQ8IUR6 639 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 OTUD6BQ8N6M0 293 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 SOS1Q07889 1333 aaPredicted RBP12.35□□□□□ -0.43
VPS18-201ENST00000220509 STARD3NLO95772 234 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 DDIT3P35638 169 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 AKAP17AQ02040 695 aaKnown RBP12.35□□□□□ -0.43
VPS18-201ENST00000220509 CKAP2LQ8IYA6 745 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 KLHDC4Q8TBB5 520 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
VPS18-201ENST00000220509 UBAP1LF5GYI3 381 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 TRIM29Q14134 588 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 MEX3CQ5U5Q3 659 aaKnown RBP12.34□□□□□ -0.43
VPS18-201ENST00000220509 PRIMPOLQ96LW4 560 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 LMTK3Q96Q04 1460 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 IDH1O75874 414 aaKnown RBP12.34□□□□□ -0.43
VPS18-201ENST00000220509 DDX46Q7L014 1031 aaKnown RBP12.34□□□□□ -0.43
VPS18-201ENST00000220509 EVI5LQ96CN4 794 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 MPHOSPH8Q99549 860 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 NOL10Q9BSC4 688 aaKnown RBP12.34□□□□□ -0.43
VPS18-201ENST00000220509 USP16Q9Y5T5 823 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 ANKARQ7Z5J8 1434 aa12.34□□□□□ -0.43
VPS18-201ENST00000220509 IFIT1P09914 478 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms