RNA–Protein interactions for RNA: ENSMUST00000201549.3

Scn8a-213, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

APPRIS P5 TSL 5 BASIC

Gene Scn8a, Length 7,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-213ENSMUST00000201549 Wasf1Q8R5H6 559 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Cfap157Q0VFX2 523 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Tmem87aQ8BXN9 555 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Lamc1P02468 1607 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Fam208aQ69ZR9 1610 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Arglu1Q3UL36 271 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 SfswapQ3USH5 945 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ankrd40Q5SUE8 363 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Ptcd1Q8C2E4 695 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Hmg20bQ9Z104 317 aa10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Scaf11E9PZM7 1456 aaKnown RBP10.59□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Map3k19E9Q3S4 1311 aa10.58□□□□□ -0.71
Scn8a-213ENSMUST00000201549 Grm8P47743 908 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gnat3Q3V3I2 354 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ano1Q8BHY3 960 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Nlrp3Q8R4B8 1033 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Trim34aQ99PP6 485 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Acsbg1Q99PU5 721 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Bach1P97302 739 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Hspa4Q61316 841 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gm21985Q6P6P5 1106 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Erlin2Q8BFZ9 340 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Tmem87bQ8BKU8 555 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Zeb2Q9R0G7 1215 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Kiaa1107Q80TK0 1369 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Pde4bB1AWC9 736 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Mcm6P97311 821 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Abcf1Q6P542 837 aaKnown RBP10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Vps16Q920Q4 839 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 BlvraQ9CY64 295 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 DymQ8CHY3 669 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Riok1Q922Q2 567 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gli2Q0VGT2 1544 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Prrc2bQ7TPM1 1486 aaKnown RBP10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Myd88P22366 296 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Sdc2P43407 202 aa10.58□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Pde3aQ9Z0X4 1141 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 AatkQ80YE4 1365 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Dnm1P39053 867 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Rapgef4Q9EQZ6 1011 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Capn12Q9ER56 720 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Dot1lQ6XZL8 1540 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gm45015A0A140LII9 184 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gm18336A0A140LIU8 765 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ccdc112A0AUP1 442 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 GphnQ8BUV3 769 aaKnown RBP10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 GckrQ91X44 587 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Plch2A2AP18 1501 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Exoc8Q6PGF7 716 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Adck5Q80V03 582 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ddx27Q921N6 760 aaKnown RBP10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Rad50P70388 1312 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Metap2O08663 478 aaKnown RBP10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Serpinb6bO08804 377 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Hoxb7P09024 217 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Jakmip3Q5DTN8 844 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ccdc94Q9D6J3 314 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Col17a1Q07563 1470 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gng11P61953 73 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Eya1P97767 591 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ubash3aQ3V3E1 624 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Naa30Q8CES0 364 aa10.57□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Abcc1O35379 1528 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Mmp8O70138 465 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Map2k1P31938 393 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Map9Q3TRR0 646 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Utp18Q5SSI6 552 aaKnown RBP10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Tex2Q6ZPJ0 1128 aaKnown RBP10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Cnpy2Q9QXT0 182 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Cdc42bpaQ3UU96 1719 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ccdc191J3QQ27 883 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Lrrc45Q8CIM1 670 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gys2Q8VCB3 704 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Dennd4bQ3U1Y4 1499 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Pafah1b1P63005 410 aaKnown RBP10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Tmem94Q7TSH8 1360 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Dapk3O54784 448 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Mindy4Q3UQI9 744 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Nfxl1E9Q8I7 918 aaKnown RBP10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Gm42641I6L9G2 585 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Edc4Q3UJB9 1406 aaKnown RBP10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 AtripQ8BMG1 785 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ccdc150Q8CDI7 1110 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Nphp3Q7TNH6 1325 aa10.56□□□□□ -0.72
Scn8a-213ENSMUST00000201549 1700122O11RikJ3QPW6 241 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Pip4k2aO70172 405 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Rufy3Q9D394 469 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Cwc25Q9DBF7 416 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Sil1Q9EPK6 465 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Pbrm1Q8BSQ9 1634 aaKnown RBP10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ppp1r10Q80W00 888 aaKnown RBP10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Baiap2l1Q9DBJ3 514 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Myom2Q14BI5 1463 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Mroh7A2AVR2 1279 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Talpid3E9PV87 1520 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ccdc12Q8R344 166 aaKnown RBP10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Skor2A7M7C7 1008 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Txndc16Q7TN22 820 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Grpel1Q99LP6 217 aa10.55□□□□□ -0.72
Scn8a-213ENSMUST00000201549 Ankrd1Q9CR42 319 aa10.55□□□□□ -0.72
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms