RNA–Protein interactions for RNA: ENSMUST00000187758.6

Usp40-204, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Usp40, Length 3,977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-204ENSMUST00000187758 NppbP40753 121 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 VeztQ3ZK22 780 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ppip5k2Q6ZQB6 1129 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Zkscan8Q8BSL0 588 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Il1rapl2Q9ERS6 686 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Tbc1d4Q8BYJ6 1307 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Gpr182P43142 395 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Timm10P62073 90 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Tktl2Q9D4D4 627 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Ankrd31A0A140LI88 1765 aa9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 Mybbp1aQ7TPV4 1344 aaKnown RBP9.1□□□□□ -0.95
Usp40-204ENSMUST00000187758 C4bP01029 1738 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Nol8Q3UHX0 1147 aaKnown RBP9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Unc5clQ6R653 518 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Prune1Q8BIW1 454 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Tmem266Q8BZB3 538 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 MccE9PWI3 1003 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Jdp2P97875 163 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Atp2b3Q0VF55 1220 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Arid3aQ62431 601 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Rab3gap1Q80UJ7 981 aa9.09□□□□□ -0.95
Usp40-204ENSMUST00000187758 Slc38a10Q5I012 1090 aa9.08□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ubn2Q80WC1 1314 aa9.08□□□□□ -0.96
Usp40-204ENSMUST00000187758 Zfyve9A2A8R0 1397 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 4931408C20RikE9PWP9 1381 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Rbbp8nlA2ABX0 614 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Plbd2Q3TCN2 594 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 EspnlQ3UYR4 1005 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ddx11Q6AXC6 880 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Fam102bQ8BQS4 339 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Krt25Q8VCW2 446 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Rbm5Q91YE7 815 aaKnown RBP9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Kif2cQ922S8 721 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Bin2D3Z6Q9 489 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Akt1s1Q9D1F4 257 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Tfip11Q9ERA6 838 aaKnown RBP9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Vps54Q5SPW0 977 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Sumf1Q8R0F3 372 aa9.07□□□□□ -0.96
Usp40-204ENSMUST00000187758 Gm7347D3YYI9 267 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Speer4aF8VPX6 267 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Tlr8P58682 1032 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Asap2Q7SIG6 958 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ipo4Q8VI75 1082 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Chrna2Q91X60 512 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Speer4dL7N216 212 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 TsksO54887 585 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 MecomP14404 1042 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Fam198bQ3UPI1 517 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Msl1Q6PDM1 616 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Tmem143Q8VD26 458 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Gja10Q9WUS4 505 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Greb1lB9EJV3 1913 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 1700029H14RikE9PY36 240 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Znf692Q3U381 531 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Tnpo1Q8BFY9 898 aaKnown RBP9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Fbxo3Q9DC63 480 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Sh3tc1G3X9F6 1346 aa9.06□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ppfia1B2RXQ2 1266 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Pde8bE9Q4S1 865 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ube4aE9Q735 1028 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ddx46Q569Z5 1032 aaKnown RBP9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Golim4Q8BXA1 655 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Top1mtQ8R4U6 593 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Riok1Q922Q2 567 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Sptbn5F6UCX4 1208 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Wdhd1P59328 1117 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Kiaa0753Q6A000 959 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Sde2Q8K1J5 448 aaKnown RBP9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Sf3b3Q921M3 1217 aaKnown RBP9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Gm10093D3YYI8 482 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Hdac1O09106 482 aaKnown RBP9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ppp1r9bQ6R891 817 aaKnown RBP9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Fam160b2Q80YR2 744 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 St5Q924W7 1134 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Rdm1Q9CQK3 281 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 PhaxQ9JJT9 385 aaKnown RBP9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Sh3bp5Q9Z131 463 aa9.05□□□□□ -0.96
Usp40-204ENSMUST00000187758 Nphp3Q7TNH6 1325 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 Prdm11A2AGX3 565 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ltv1Q6NSQ7 470 aaKnown RBP9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ift57Q8BXG3 429 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 TnksQ6PFX9 1320 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 Apba2P98084 750 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 1700010I14RikQ7TPG0 532 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 CpvlQ9D3S9 478 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 Naa16Q9DBB4 864 aa9.04□□□□□ -0.96
Usp40-204ENSMUST00000187758 Duox1A2AQ92 1551 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Jakmip1Q8BVL9 626 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Plch1Q4KWH5 1682 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Casz1Q9CWL2 1761 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Slc4a1P04919 929 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 IntuQ059U7 942 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Spata31d1bE9QA57 1361 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Sept1P42209 366 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Rps8P62242 208 aaKnown RBP9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ppil4Q9CXG3 492 aaKnown RBP9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Dydc2Q9D3X8 139 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Kcnq5Q9JK45 933 aa9.03□□□□□ -0.96
Usp40-204ENSMUST00000187758 Ubr3Q5U430 1889 aa9.02□□□□□ -0.96
Usp40-204ENSMUST00000187758 Gm4340L7N2C4 268 aa9.02□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 51.2 ms