RNA–Protein interactions for RNA: ENSMUST00000173727.7

Lig3-212, Transcript of DNA ligase 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Lig3, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-212ENSMUST00000173727 Itga6Q61739 1091 aa13.03□□□□□ -0.32
Lig3-212ENSMUST00000173727 HmcesQ8R1M0 353 aaKnown RBP13.03□□□□□ -0.32
Lig3-212ENSMUST00000173727 Dpf1Q9QX66 387 aa13.03□□□□□ -0.32
Lig3-212ENSMUST00000173727 Kdm3aQ6PCM1 1323 aa13.03□□□□□ -0.32
Lig3-212ENSMUST00000173727 Il4rP16382 810 aa13.03□□□□□ -0.32
Lig3-212ENSMUST00000173727 1700010I14RikQ7TPG0 532 aa13.03□□□□□ -0.32
Lig3-212ENSMUST00000173727 Fam102bQ8BQS4 339 aa13.03□□□□□ -0.32
Lig3-212ENSMUST00000173727 Ankrd13dQ6PD24 605 aa13.02□□□□□ -0.32
Lig3-212ENSMUST00000173727 Gimap8Q75N62 688 aa13.02□□□□□ -0.32
Lig3-212ENSMUST00000173727 Gpr182P43142 395 aa13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 RtcbQ99LF4 505 aaKnown RBP13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Ttc14Q9CSP9 761 aa13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Ppfia1B2RXQ2 1266 aa13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Anxa1P10107 346 aaKnown RBP13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Atp8a2P98200 1148 aa13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Mctp2Q5RJH2 878 aa13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rnf123Q5XPI3 1314 aa13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Mybbp1aQ7TPV4 1344 aaKnown RBP13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Ly75Q60767 1723 aa13.02□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rtkn2Q14B46 604 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Zkscan8Q8BSL0 588 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rbbp8nlA2ABX0 614 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Stox1B2RQL2 990 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Ddx11Q6AXC6 880 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 DekQ7TNV0 380 aaKnown RBP13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Pde4bB1AWC9 736 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 CltaO08585 235 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 SlkO54988 1233 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Vps54Q5SPW0 977 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Ssh1Q76I79 1042 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Tmem266Q8BZB3 538 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rrp9Q91WM3 475 aaKnown RBP13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Pmfbp1Q9WVQ0 1022 aa13.01□□□□□ -0.33
Lig3-212ENSMUST00000173727 Catsper2A2ARP9 588 aa13□□□□□ -0.33
Lig3-212ENSMUST00000173727 Top1mtQ8R4U6 593 aa13□□□□□ -0.33
Lig3-212ENSMUST00000173727 Npy5rO70342 466 aa13□□□□□ -0.33
Lig3-212ENSMUST00000173727 Kiaa0319Q5SZV5 1081 aa13□□□□□ -0.33
Lig3-212ENSMUST00000173727 Srp68Q8BMA6 625 aaKnown RBP13□□□□□ -0.33
Lig3-212ENSMUST00000173727 EngaseQ8BX80 734 aa13□□□□□ -0.33
Lig3-212ENSMUST00000173727 Asap2Q7SIG6 958 aa13□□□□□ -0.33
Lig3-212ENSMUST00000173727 Phf14Q9D4H9 881 aa13□□□□□ -0.33
Lig3-212ENSMUST00000173727 Snrpa1P57784 255 aaKnown RBP12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Jakmip1Q8BVL9 626 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Krt25Q8VCW2 446 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Zkscan16A2ALW2 728 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Mcm4P49717 862 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Slc38a10Q5I012 1090 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rab3gap1Q80UJ7 981 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Mrps27Q8BK72 415 aaKnown RBP12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 DmtnQ9WV69 405 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 4931408C20RikE9PWP9 1381 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Tshz3Q8CGV9 1081 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Plekho1Q9JIY0 408 aa12.99□□□□□ -0.33
Lig3-212ENSMUST00000173727 Plch1Q4KWH5 1682 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Bin2D3Z6Q9 489 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rfx1P48377 963 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Atp2b3Q0VF55 1220 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Foxo3Q9WVH4 672 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rad50P70388 1312 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Nphp3Q7TNH6 1325 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Ddx46Q569Z5 1032 aaKnown RBP12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Antxr1Q9CZ52 562 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Mlh1Q9JK91 760 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Terf2O35144 541 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 MecomP14404 1042 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 Stk11ipQ3TAA7 1072 aa12.98□□□□□ -0.33
Lig3-212ENSMUST00000173727 TsksO54887 585 aa12.97□□□□□ -0.33
Lig3-212ENSMUST00000173727 VeztQ3ZK22 780 aa12.97□□□□□ -0.33
Lig3-212ENSMUST00000173727 Slc4a1P04919 929 aa12.97□□□□□ -0.33
Lig3-212ENSMUST00000173727 Anapc15P60007 132 aa12.97□□□□□ -0.33
Lig3-212ENSMUST00000173727 Plbd2Q3TCN2 594 aa12.97□□□□□ -0.33
Lig3-212ENSMUST00000173727 Golim4Q8BXA1 655 aa12.97□□□□□ -0.33
Lig3-212ENSMUST00000173727 Mdm2P23804 489 aa12.96□□□□□ -0.33
Lig3-212ENSMUST00000173727 EappQ5BU09 281 aa12.96□□□□□ -0.33
Lig3-212ENSMUST00000173727 Kdm4cQ8VCD7 1054 aa12.96□□□□□ -0.33
Lig3-212ENSMUST00000173727 Dbndd1Q9CZ00 160 aa12.96□□□□□ -0.33
Lig3-212ENSMUST00000173727 Vars2Q3U2A8 1060 aa12.96□□□□□ -0.33
Lig3-212ENSMUST00000173727 Rdm1Q9CQK3 281 aa12.96□□□□□ -0.33
Lig3-212ENSMUST00000173727 Tktl2Q9D4D4 627 aa12.96□□□□□ -0.33
Lig3-212ENSMUST00000173727 Amhr2Q8K592 568 aa12.96□□□□□ -0.34
Lig3-212ENSMUST00000173727 PhaxQ9JJT9 385 aaKnown RBP12.96□□□□□ -0.34
Lig3-212ENSMUST00000173727 Pde8bE9Q4S1 865 aa12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 Hmgb2P30681 210 aaKnown RBP12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 Pim2Q62070 370 aa12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ms4a2P20490 235 aa12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 Fbxo3Q9DC63 480 aa12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 Lrp5Q91VN0 1614 aa12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ifit2Q64112 472 aa12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 TnksQ6PFX9 1320 aa12.95□□□□□ -0.34
Lig3-212ENSMUST00000173727 Eva1cP58659 440 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ltv1Q6NSQ7 470 aaKnown RBP12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 AnlnQ8K298 1121 aaKnown RBP12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 LlphQ9D945 130 aaKnown RBP12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Snapc4Q8BP86 1333 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ppil4Q9CXG3 492 aaKnown RBP12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Fam84aQ9D650 292 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Kcnq5Q9JK45 933 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Sh3bp5Q9Z131 463 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Ccne2Q9Z238 404 aa12.94□□□□□ -0.34
Lig3-212ENSMUST00000173727 Cfap44E9Q5M6 1843 aa12.94□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms