RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Tlr7P58681 1050 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Cct4P80315 539 aaKnown RBP12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ggt6Q6PDE7 497 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Larp1Q6ZQ58 1072 aaKnown RBP12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Pdzd9Q9D9M4 266 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Nfe2l3Q9WTM4 660 aa12.75□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Arhgef1Q61210 920 aaKnown RBP12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Nrbp1Q99J45 535 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Q9D9S1 216 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ndufa8Q9DCJ5 172 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Rad50P70388 1312 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Zkscan7E9PVW1 718 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Eif4a1P60843 406 aaKnown RBP12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Nucb2P81117 420 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Tbc1d30Q69ZT9 766 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Tti2Q8BGV4 512 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Top1mtQ8R4U6 593 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Speer4bQ9D9F7 267 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Irx4Q9QY61 515 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Tbc1d8Q9Z1A9 1134 aa12.74□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 FocadA2AKG8 1798 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Fkbp4P30416 458 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Bend3Q6PAL0 825 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Nap1l3Q794H2 544 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Atg3Q9CPX6 314 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Echdc1Q9D9V3 322 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Sema3fO88632 785 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ano6Q6P9J9 911 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Ppm1eQ80TL0 749 aa12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Mphosph10Q810V0 681 aaKnown RBP12.73□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Oas2E9Q9A9 742 aa12.72□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Bcl2l13P59017 434 aa12.72□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Card6E9PWH2 1175 aa12.72□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Oxsr1Q6P9R2 527 aa12.72□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Slx1bQ8BX32 270 aa12.72□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Gm21680A0A0G2JGR8 267 aa12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 RdxP26043 583 aaKnown RBP12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Btbd11Q6GQW0 1109 aa12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 CrebrfQ8CDG5 640 aaKnown RBP12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Phkg2Q9DB30 406 aa12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Pard3Q99NH2 1333 aa12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Plekhd1B2RPU2 505 aa12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Pa2g4P50580 394 aaKnown RBP12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Chmp7Q8R1T1 451 aa12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Mrpl50Q8VDT9 159 aaKnown RBP12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 PdcQ9QW08 244 aa12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Add3Q9QYB5 706 aaKnown RBP12.71□□□□□ -0.37
Prpf40b-202ENSMUST00000118287 Cspp1B2RX88 1205 aa12.71□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Mctp1E9PV86 951 aa12.71□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Pkp1P97350 728 aaKnown RBP12.71□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Esyt1Q3U7R1 1092 aaKnown RBP12.71□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Marf1Q8BJ34 1730 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ice2Q3UZ18 988 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ifit2Q64112 472 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Eno4Q8C042 619 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 4930572O03RikQ8C5Y0 211 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Edc3Q8K2D3 508 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Slc5a4bQ91ZP4 660 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 TnmdQ9EP64 317 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Spata31d1bE9QA57 1361 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 FosbP13346 338 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Tyro3P55144 880 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Gabpb2P81069 414 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Asic4Q7TNS7 539 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Sugp2Q8CH09 1067 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Lrrc59Q922Q8 307 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Trim66Q924W6 1242 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 NaspQ99MD9 773 aaKnown RBP12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Psrc1Q9D0P7 329 aa12.7□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 MecomP14404 1042 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ppfia3P60469 1194 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Tgfb1i1Q62219 461 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Gm21663A0A0G2JE01 267 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ppfia1B2RXQ2 1266 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Gm7361D3Z6R1 267 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 5031410I06RikE9Q4E0 267 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Gm1979E9QAN3 267 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Gm5862K7N5V5 267 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Gm10220K7N660 267 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Hmgb1P63158 215 aaKnown RBP12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ddx46Q569Z5 1032 aaKnown RBP12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Sh3bgrQ9WUZ7 214 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Dlg5E9Q9R9 1921 aa12.69□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Cdkn1cP49919 348 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Kcnj4P52189 445 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Fam177a1Q8BR63 207 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 MafgO54790 162 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Nop14Q8R3N1 860 aaKnown RBP12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Bicd2Q921C5 820 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Il1rapl2Q9ERS6 686 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Tns2Q8CGB6 1400 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Tnks1bp1P58871 1720 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Ccdc162pQ0VG85 912 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Map3k2Q61083 619 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Jarid2Q62315 1234 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Adam1bQ8R534 806 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Add2Q9QYB8 725 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Igbp1bQ9QZ29 343 aa12.68□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Abcc12Q80WJ6 1366 aa12.67□□□□□ -0.38
Prpf40b-202ENSMUST00000118287 Akap11E9Q777 1895 aa12.67□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms