RNA–Protein interactions for RNA: ENSMUST00000110522.9

Trim9-202, Transcript of E3 ubiquitin-protein ligase TRIM9, mousemouse

TSL 1 (best) BASIC

Gene Trim9, Length 4,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9-202ENSMUST00000110522 Zbtb43Q9DAI4 467 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Ttll7A4Q9F0 912 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Pdia4P08003 638 aaKnown RBP13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Il4rP16382 810 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Kdm4cQ8VCD7 1054 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Rrp9Q91WM3 475 aaKnown RBP13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Trim11Q99PQ2 467 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Zkscan7E9PVW1 718 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 TnksQ6PFX9 1320 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Eif2ak4Q9QZ05 1648 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gm45015A0A140LII9 184 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gm18336A0A140LIU8 765 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Utp18Q5SSI6 552 aaKnown RBP13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gtf2a1Q99PM3 378 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 CpvlQ9D3S9 478 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Kdm3aQ6PCM1 1323 aa13.1□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gm7347D3YYI9 267 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Speer4aF8VPX6 267 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Dctn1O08788 1281 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 IntuQ059U7 942 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Cep131Q62036 1060 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gm12185Q5NCB2 835 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Ppp1r10Q80W00 888 aaKnown RBP13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Rnf41Q8BH75 317 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Chd1lQ9CXF7 900 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Syde2E9PUP1 1314 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Cers3Q1A3B0 383 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Slu7Q8BHJ9 585 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Srgap1Q91Z69 1062 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gnl2Q99LH1 728 aaKnown RBP13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 SrrtQ99MR6 875 aaKnown RBP13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Mrps25Q9D125 171 aaKnown RBP13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Rufy3Q9D394 469 aa13.09□□□□□ -0.31
Trim9-202ENSMUST00000110522 Slc4a4O88343 1079 aa13.08□□□□□ -0.31
Trim9-202ENSMUST00000110522 Esyt1Q3U7R1 1092 aaKnown RBP13.08□□□□□ -0.31
Trim9-202ENSMUST00000110522 Tango6Q8C3S2 1079 aa13.08□□□□□ -0.31
Trim9-202ENSMUST00000110522 Mmel1Q9JLI3 765 aa13.08□□□□□ -0.31
Trim9-202ENSMUST00000110522 Kdm6aO70546 1401 aa13.08□□□□□ -0.31
Trim9-202ENSMUST00000110522 Gcom1E9PZ54 550 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Zscan29E9Q5B4 869 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 MyzapQ3UIJ9 466 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Lamb3Q61087 1168 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ankrd13dQ6PD24 605 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ndufa8Q9DCJ5 172 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Kank4Q6P9J5 1016 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Pik3ap1Q9EQ32 811 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Abtb2Q7TQI7 1024 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ufl1Q8CCJ3 793 aaKnown RBP13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Tmc2Q8R4P4 888 aa13.08□□□□□ -0.32
Trim9-202ENSMUST00000110522 Qtrt2B8ZXI1 415 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Luzp1Q8R4U7 1068 aaKnown RBP13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Letm1Q9Z2I0 738 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Knl1Q66JQ7 1612 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Cfap73J3QPZ5 306 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 RgmbQ7TQ33 436 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ttc12Q8BW49 704 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Tmx3Q8BXZ1 456 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Vps16Q920Q4 839 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Esco1Q69Z69 843 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Lmbr1Q9JIT0 490 aa13.07□□□□□ -0.32
Trim9-202ENSMUST00000110522 Myl3P09542 204 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Bag1Q60739 355 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Itga6Q61739 1091 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Cep120Q7TSG1 988 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Usp25P57080 1055 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 WtapQ9ER69 396 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Wdhd1P59328 1117 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Mtmr3Q8K296 1196 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Psrc1Q9D0P7 329 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 MthfsQ9D110 203 aa13.06□□□□□ -0.32
Trim9-202ENSMUST00000110522 Hecw1Q8K4P8 1604 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Hvcn1Q3U2S8 269 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Znhit6Q3UFB2 460 aaKnown RBP13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ppp4r3bQ922R5 820 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Nap1l1P28656 391 aaKnown RBP13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Prdm1Q60636 856 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 HellsQ60848 821 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Tmco3Q8BH01 678 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Smim5Q8BT42 78 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Naa30Q8CES0 364 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Cdca7lQ922M5 438 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Adgrb3Q80ZF8 1522 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Clasp1Q80TV8 1535 aaKnown RBP13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ccdc112A0AUP1 442 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ccdc82Q6PG04 518 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ccdc150Q8CDI7 1110 aa13.05□□□□□ -0.32
Trim9-202ENSMUST00000110522 Dennd3A2RT67 1274 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Fam13bQ8K2H3 851 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 TsksO54887 585 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Myl10Q62082 202 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Rps6kb1Q8BSK8 525 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Triml1Q8BVP1 470 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Dis3l2Q8CI75 870 aaKnown RBP13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Neurl4Q5NCX5 1563 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Prl3d2F6R3P9 224 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Prl7a2O54831 253 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ncbp1Q3UYV9 790 aaKnown RBP13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Ercc6l2Q9JIM3 1537 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Unc5clQ6R653 518 aa13.04□□□□□ -0.32
Trim9-202ENSMUST00000110522 Cep89Q9CZX2 791 aa13.04□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 22.2 ms