RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Ltbp1Q8CG19 1712 aa12.92□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Plcb2A3KGF7 1181 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 MecomP14404 1042 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Gpr182P43142 395 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 NpeppsQ11011 920 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 RubcnlQ3TD16 648 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Tmem266Q8BZB3 538 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Bag4Q8CI61 457 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Emilin2Q8K482 1074 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Krt25Q8VCW2 446 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Rufy3Q9D394 469 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Lrp5Q91VN0 1614 aa12.91□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Elmsan1E9Q2I4 1089 aaKnown RBP12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Mctp2Q5RJH2 878 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Nek11Q8C0Q4 628 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Cdca7lQ922M5 438 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Fam84aQ9D650 292 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Mybbp1aQ7TPV4 1344 aaKnown RBP12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 GakQ99KY4 1305 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Prr29B1ARI9 187 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Rasa1E9PYG6 1038 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Anxa1P10107 346 aaKnown RBP12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Cyp2d10P24456 504 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Atp8a2P98200 1148 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Ddx19aQ61655 478 aaKnown RBP12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Zkscan8Q8BSL0 588 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Golim4Q8BXA1 655 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 SnrkQ8VDU5 748 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 PhaxQ9JJT9 385 aaKnown RBP12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Kdm3aQ6PCM1 1323 aa12.9□□□□□ -0.34
Ttc39a-202ENSMUST00000106618 Nhsl1Q8CAF4 1587 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 InhbeO08717 350 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Cyp7a1Q64505 503 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Slf2Q6P9P0 1278 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Susd4Q8BH32 490 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Sp8Q8BMJ8 486 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Rdm1Q9CQK3 281 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Ppil4Q9CXG3 492 aaKnown RBP12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Pus3Q9JI38 481 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Gm45015A0A140LII9 184 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Gm18336A0A140LIU8 765 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Sema6bO54951 886 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Mcm4P49717 862 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Sgsm1Q8BPQ7 1093 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Mb21d2Q8C525 428 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Rtn4Q99P72 1162 aaKnown RBP12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Trip6Q9Z1Y4 480 aa12.89□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 C4bP01029 1738 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Cfap44E9Q5M6 1843 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Bicdl1A0JNT9 577 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 1700006A11RikB9EHI3 544 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Trim34bJ3QNR8 485 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Itga6Q61739 1091 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 SowahdQ8BY98 327 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Atf7Q8R0S1 413 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Ccdc9Q8VC31 543 aaKnown RBP12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Polr3dQ91WD1 398 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Npc1l1Q6T3U4 1333 aa12.88□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Plch1Q4KWH5 1682 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Myh7Q91Z83 1935 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 TsksO54887 585 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Pkp1P97350 728 aaKnown RBP12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Ifit1bl2Q3U687 466 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 MypopQ8R4U1 393 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Trim34aQ99PP6 485 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Q9D9S1 216 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Cyp3a57D3YYZ0 503 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Dctn1O08788 1281 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 F2rP30558 430 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Snai1Q02085 264 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Slc38a10Q5I012 1090 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Ltv1Q6NSQ7 470 aaKnown RBP12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Rab3gap1Q80UJ7 981 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Pof1bQ8K4L4 587 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 PtmsQ9D0J8 101 aaKnown RBP12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Ccne2Q9Z238 404 aa12.87□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 4931408C20RikE9PWP9 1381 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Cntnap1O54991 1385 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Bin2D3Z6Q9 489 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Syt1P46096 421 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Atp2b3Q0VF55 1220 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 4933416C03RikQ3V063 378 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Kank4Q6P9J5 1016 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 St18Q80TY4 1045 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Mrpl50Q8VDT9 159 aaKnown RBP12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Lrrfip2Q91WK0 415 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Kcnq5Q9JK45 933 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Hmg20bQ9Z104 317 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 TnksQ6PFX9 1320 aa12.86□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Plekhf1Q3TB82 279 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Rnf20Q5DTM8 973 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Usp44Q8C2S0 711 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Cchcr1Q8K2I2 770 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Erc1Q99MI1 1120 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 4930523C07RikE9Q2T4 99 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Cyp2c23E9Q5K4 494 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Spryd3E9Q9B3 442 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Smarcc1P97496 1104 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Rtkn2Q14B46 604 aa12.85□□□□□ -0.35
Ttc39a-202ENSMUST00000106618 Psma5Q9Z2U1 241 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 13.1 ms