RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Rps8P62242 208 aaKnown RBP12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Mcm2P97310 904 aa12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 GorabQ8BRM2 368 aa12.14□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 1700123L14RikQ3V2K7 440 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Sf3a1Q8K4Z5 791 aaKnown RBP12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Tmc2Q8R4P4 888 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Zkscan2G3X952 960 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Atp2b3Q0VF55 1220 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Rbm27Q5SFM8 1060 aaKnown RBP12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ppp4r3aQ6P2K6 820 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Slc39a11Q8BWY7 342 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Myh1Q5SX40 1942 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Celf1P28659 486 aaKnown RBP12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Prom2Q3UUY6 835 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Adarb2Q9JI20 745 aa12.13□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 DbnlQ62418 436 aa12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Slc14a2Q8R4T9 930 aa12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Slc38a10Q5I012 1090 aa12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Vps54Q5SPW0 977 aa12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Brf1Q8CFK2 676 aa12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Mrc1Q61830 1456 aa12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Erc2Q6PH08 957 aa12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Atxn2lQ7TQH0 1049 aaKnown RBP12.12□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Mybbp1aQ7TPV4 1344 aaKnown RBP12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Znf496Q5SXI5 585 aa12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Strip1Q8C079 837 aa12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Kiaa0232Q80U59 1396 aaKnown RBP12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Oas2E9Q9A9 742 aa12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Znf428Q8C1M2 176 aa12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Dydc2Q9D3X8 139 aa12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Lgr5Q9Z1P4 907 aa12.11□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Glg1Q61543 1175 aaKnown RBP12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Trpc5Q9QX29 975 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 NfkbibQ60778 359 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Prune1Q8BIW1 454 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 HlfQ8BW74 295 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Sf3b3Q921M3 1217 aaKnown RBP12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ak7Q9D2H2 614 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 4931408C20RikE9PWP9 1381 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ccdc183A2AJB1 534 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Nlrp1aQ2LKU9 1182 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 EspnlQ3UYR4 1005 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ddx46Q569Z5 1032 aaKnown RBP12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Phlpp2Q8BXA7 1320 aa12.1□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Pde8bE9Q4S1 865 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ube4aE9Q735 1028 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Atp8a2P98200 1148 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Gja5Q01231 358 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Speer4dL7N216 212 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 NfixP70257 488 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ufl1Q8CCJ3 793 aaKnown RBP12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ccne2Q9Z238 404 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Ildr2B5TVM2 661 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Cyp2c67Q569X9 491 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Rbm17Q8JZX4 405 aaKnown RBP12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 ParvgQ9ERD8 331 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 C4bP01029 1738 aa12.09□□□□□ -0.47
Ccdc38-201ENSMUST00000092215 Golim4Q8BXA1 655 aa12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 McamQ8R2Y2 648 aaKnown RBP12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Noc3lQ8VI84 807 aaKnown RBP12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 CenpbP27790 599 aa12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Plbd2Q3TCN2 594 aa12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Pram1Q6BCL1 675 aa12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Ciao1Q99KN2 339 aa12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Nkx1-2P42580 305 aa12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Spata31d1bE9QA57 1361 aa12.08□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 TsksO54887 585 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Kiaa0753Q6A000 959 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 RestQ8VIG1 1082 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Atp6v0a2P15920 856 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Tbc1d9Q3UYK3 1264 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Fam228bQ497Q6 232 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Klf15Q9EPW2 415 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Col11a2Q64739 1736 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Rbbp8nlA2ABX0 614 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Plcd4Q8K3R3 807 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Taf5lQ91WQ5 589 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Lama4P97927 1816 aa12.07□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Liat1Q810M6 228 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Krt25Q8VCW2 446 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Map3k15A2AQW0 1331 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 IarsQ8BU30 1262 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Gdf11Q9Z1W4 405 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Kdm3aQ6PCM1 1323 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Ubr3Q5U430 1889 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 GabrdP22933 449 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Sptlc3Q8BG54 563 aa12.06□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 MecomP14404 1042 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Psd3Q2PFD7 1037 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Fchsd1Q6PFY1 688 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Atp6v1aP50516 617 aaKnown RBP12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Ipo8Q7TMY7 1010 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Tmem266Q8BZB3 538 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Osbpl5Q9ER64 874 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Irs4Q9Z0Y7 1216 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 TnksQ6PFX9 1320 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Sned1Q70E20 1403 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Sipa1l3G3X9J0 1776 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Slc4a1P04919 929 aa12.05□□□□□ -0.48
Ccdc38-201ENSMUST00000092215 Chrna5Q2MKA5 467 aa12.05□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 35.8 ms