RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 Igbp1bQ9QZ29 343 aa13.51□□□□□ -0.25
Trim23-203ENSMUST00000069187 Pnpla7A2AJ88 1352 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 FocadA2AKG8 1798 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Hmox1P14901 289 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Vps33bP59016 617 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Ms4a2P20490 235 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Gpatch11Q3UFS4 262 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Fkbp5Q64378 456 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Bend3Q6PAL0 825 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Nup88Q8CEC0 753 aaKnown RBP13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Atg3Q9CPX6 314 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Zkscan5Q9Z1D8 819 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Wdr33Q8K4P0 1330 aaKnown RBP13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Mst1rQ62190 1378 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Map7d2A2AG50 781 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Ttll7A4Q9F0 912 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Ifi35Q9D8C4 286 aa13.5□□□□□ -0.25
Trim23-203ENSMUST00000069187 Bms1Q6PGF5 1284 aaKnown RBP13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Dcaf5Q80T85 946 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Prune1Q8BIW1 454 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Stk36Q69ZM6 1316 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Brpf1B2RRD7 1212 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Tshz1Q5DTH5 1084 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Ddx58Q6Q899 926 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Smc3Q9CW03 1217 aaKnown RBP13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Nip7Q9CXK8 180 aaKnown RBP13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Creld2Q9CYA0 350 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 Lmbr1lQ9D1E5 489 aa13.49□□□□□ -0.25
Trim23-203ENSMUST00000069187 CebpzP53569 1052 aaKnown RBP13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Gm12185Q5NCB2 835 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Zfp397Q7TNK4 527 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Jakmip1Q8BVL9 626 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Spata31d1bE9QA57 1361 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Mcm3P25206 812 aaKnown RBP13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Bsdc1Q80Y55 427 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Wdr24Q8CFJ9 790 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Slx4ipQ9D7Y9 413 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Snx13Q6PHS6 957 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Vps33aQ9D2N9 598 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Pmfbp1Q9WVQ0 1022 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Rad50P70388 1312 aa13.48□□□□□ -0.25
Trim23-203ENSMUST00000069187 Bicdl1A0JNT9 577 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 1700006A11RikB9EHI3 544 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Mmp8O70138 465 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Flt4P35917 1363 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Adcy9P51830 1353 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Crb1Q8VHS2 1405 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Brpf3B2KF05 1204 aaKnown RBP13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Zscan29E9Q5B4 869 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Grm8P47743 908 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Bmp2kQ91Z96 1138 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Stard3nlQ9DCI3 235 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Zfp804bA0A0G2JGH6 1343 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Sh3bp1P55194 680 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Atp8b2P98199 1209 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Soga3Q6NZL0 945 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Nphp3Q7TNH6 1325 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Nol12Q8BG17 217 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 CenpqQ9CPQ5 267 aa13.47□□□□□ -0.25
Trim23-203ENSMUST00000069187 Tnks1bp1P58871 1720 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 HellsQ60848 821 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Ankib1Q6ZPS6 1085 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Chmp4cQ9D7F7 232 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Syde2E9PUP1 1314 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Hspa2P17156 633 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Tshz3Q8CGV9 1081 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Otud6bQ8K2H2 294 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Mylk2Q8VCR8 613 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Rapgef4Q9EQZ6 1011 aa13.46□□□□□ -0.25
Trim23-203ENSMUST00000069187 Kif2aP28740 705 aa13.46□□□□□ -0.26
Trim23-203ENSMUST00000069187 Naa30Q8CES0 364 aa13.46□□□□□ -0.26
Trim23-203ENSMUST00000069187 Trim52Q8CDV4 233 aa13.45□□□□□ -0.26
Trim23-203ENSMUST00000069187 Ulbp1Q8HWA3 334 aa13.45□□□□□ -0.26
Trim23-203ENSMUST00000069187 4930548H24RikQ9D496 437 aa13.45□□□□□ -0.26
Trim23-203ENSMUST00000069187 Atp8b3Q6UQ17 1335 aa13.45□□□□□ -0.26
Trim23-203ENSMUST00000069187 CalcaP70160 136 aa13.45□□□□□ -0.26
Trim23-203ENSMUST00000069187 Smc4Q8CG47 1286 aa13.45□□□□□ -0.26
Trim23-203ENSMUST00000069187 Gjb2Q00977 226 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Taok3Q8BYC6 898 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Akap11E9Q777 1895 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Ier5O89113 308 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Trap1aP19473 224 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Nol10Q5RJG1 687 aaKnown RBP13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 NaspQ99MD9 773 aaKnown RBP13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Syt1P46096 421 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Tyro3P55144 880 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Sugp2Q8CH09 1067 aa13.44□□□□□ -0.26
Trim23-203ENSMUST00000069187 Card6E9PWH2 1175 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Kcnj4P52189 445 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Nlrp3Q8R4B8 1033 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Rufy3Q9D394 469 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Cntnap1O54991 1385 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Zfp597E9Q6S0 419 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Mcmdc2E9Q956 681 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Myd88P22366 296 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Igfbp6P47880 238 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Zbtb40Q6PCS8 1258 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Nap1l3Q794H2 544 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 DpydQ8CHR6 1025 aa13.43□□□□□ -0.26
Trim23-203ENSMUST00000069187 Tlr7P58681 1050 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms