RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Phf24Q80TL4 400 aa11.03□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Adamts2Q8C9W3 1213 aa11.03□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Gulp1Q8K2A1 304 aa11.03□□□□□ -0.64
Ccdc54-201ENSMUST00000062439 Map2k3O09110 347 aa11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Rad23bP54728 416 aa11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Kiaa1468Q148V7 1216 aa11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Prpf40bQ80W14 870 aa11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Lsm11Q8BUV6 361 aa11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Trim61Q8JZK6 461 aa11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Gar1Q9CY66 231 aaKnown RBP11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Srcin1Q9QWI6 1250 aa11.02□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Pik3cdO35904 1043 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Nub1P54729 614 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 MlanaQ2TA50 113 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Irf9Q61179 399 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Cd47Q61735 303 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 IqubQ8CDK3 788 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Gpr153Q8K0Z9 631 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Asb16Q8VHS5 453 aa11.01□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Lrrc63A6H694 637 aa11□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Cd200O54901 278 aa11□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Nedd1P33215 660 aa11□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Samd5Q3V1H9 173 aa11□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Cnpy4Q8BQ47 245 aa11□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Pias4Q9JM05 507 aa11□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Mrc2Q64449 1479 aa11□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Gm13040A2A8C4 496 aa10.99□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Smim22J3QP37 91 aa10.99□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Grb7Q03160 535 aa10.99□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 AgerQ62151 402 aa10.99□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Zbtb39Q6PDK0 712 aa10.99□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Alg1Q921Q3 482 aa10.99□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Ubl4bQ9CQ84 188 aa10.99□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Gm7347D3YYI9 267 aa10.98□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Pbxip1Q3TVI8 727 aa10.98□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 B3gnt3Q5JCS9 372 aa10.98□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 C130026I21RikQ8C898 291 aa10.98□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 XdhQ00519 1335 aa10.98□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Sec14l5B2RXM5 696 aa10.97□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Nfatc2ipO09130 412 aa10.97□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 TyrobpO54885 114 aa10.97□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Ccdc136Q3TVA9 1136 aa10.97□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Gm14548E9Q1Z6 680 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Zfr2E9Q5M4 874 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Sema6bO54951 886 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Bard1O70445 765 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Wee1P47810 646 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Znf48Q3US17 591 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Osbp2Q5QNQ6 908 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Plekhg5Q66T02 1073 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Pcdhb19Q91Y01 801 aa10.96□□□□□ -0.65
Ccdc54-201ENSMUST00000062439 Pcbp4P57724 403 aaKnown RBP10.95□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Gspt2Q149F3 632 aa10.95□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Dlx3Q64205 287 aa10.95□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Neurod4O09105 330 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Fgfr1P16092 822 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Cntnap5bQ0V8T8 1292 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Cpa6Q5U901 438 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Spred3Q6P6N5 408 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Foxo6Q70KY4 559 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Dhx38Q80X98 1228 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Crispld2Q8BZQ2 495 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Fermt3Q8K1B8 665 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Q922M7 232 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Wdr89Q9D0R9 386 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Prg4Q9JM99 1054 aa10.94□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Btnl6A2CG22 539 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Gm5624F6ZZG8 207 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Aldh3a2P47740 484 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Q3UPC7 1272 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Ldlrad2Q3V0V0 142 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Gpbar1Q80SS6 329 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Trim56Q80VI1 734 aaKnown RBP10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Fbxo9Q8BK06 437 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Mab21L3Q8CI17 429 aa10.93□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Adamts8P57110 905 aa10.92□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Ppfia3P60469 1194 aa10.92□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Atp4aQ64436 1033 aa10.92□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Adgrg1Q8K209 687 aa10.92□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Htr3bQ9JHJ5 437 aa10.92□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Nr2e3Q9QXZ7 395 aa10.92□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Dnajb2Q9QYI5 324 aa10.92□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Fam46aD3Z5S8 447 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Adcy1O88444 1118 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 LtkP08923 888 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 PlaurP35456 327 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Srbd1Q497V5 1015 aaKnown RBP10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 IgflQ6B9Z0 140 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Mettl3Q8C3P7 580 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Akr7a2Q8CG76 367 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Shisa2Q8QZV2 295 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Acot7Q91V12 381 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Tnfrsf12aQ9CR75 129 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Gria4Q9Z2W8 902 aa10.91□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Nfx1B1AY10 1114 aaKnown RBP10.9□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Klf16P58334 251 aa10.9□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Mettl14Q3UIK4 456 aa10.9□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Ccdc155Q80VJ8 648 aa10.9□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Tmc2Q8R4P4 888 aa10.9□□□□□ -0.66
Ccdc54-201ENSMUST00000062439 Nrif1Q923B3 828 aa10.9□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms