RNA–Protein interactions for RNA: ENSMUST00000049184.8

Ushbp1-201, Transcript of Usher syndrome type-1C protein-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ushbp1, Length 2,438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1-201ENSMUST00000049184 Bag3Q9JLV1 577 aaKnown RBP17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Znf568E9PYI1 671 aa17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Rrp1P56183 494 aaKnown RBP17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Kcnd1Q03719 651 aa17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Ppp1r10Q80W00 888 aaKnown RBP17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Zmynd15Q8C0R7 736 aa17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Nlgn1Q99K10 843 aa17.36■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 AceP09470 1312 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Fyb1O35601 819 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Spag5Q7TME2 1165 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Cdca8Q8BHX3 289 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Edc3Q8K2D3 508 aaKnown RBP17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Pcdhgc5Q91XW9 944 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Hmg20bQ9Z104 317 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Alpk3Q924C5 1678 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Nckap5lQ6GQX2 1323 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Capn2O08529 700 aa17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Eif4a1P60843 406 aaKnown RBP17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 L1td1Q587J6 782 aaKnown RBP17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Snw1Q9CSN1 536 aaKnown RBP17.35■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Dip2bQ3UH60 1574 aa17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 IghaA0A0A6YXW6 389 aa17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Gm21190A0A0G2JGJ6 266 aa17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Ccdc112A0AUP1 442 aa17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Kmt5bQ3U8K7 883 aa17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Panx2Q6IMP4 677 aa17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Mrvi1Q9WUX5 899 aaKnown RBP17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Camta1A2A891 1682 aa17.34■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Atp2b1G5E829 1220 aa17.33■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Prdm4Q80V63 803 aa17.33■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Q8BZJ8 459 aa17.33■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Slc26a8Q8R0C3 999 aa17.33■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Dusp10Q9ESS0 483 aa17.33■□□□□ 0.37
Ushbp1-201ENSMUST00000049184 Casz1Q9CWL2 1761 aa17.33■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 TrdnE9Q9K5 693 aa17.33■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 H2afxP27661 143 aaKnown RBP17.33■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 RubcnlQ3TD16 648 aa17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Ubr1O70481 1757 aa17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Fkbp4P30416 458 aa17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Samsn1P57725 372 aa17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Q3UJC8 639 aa17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Larp1Q6ZQ58 1072 aaKnown RBP17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Frat2Q8K025 231 aa17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Golph3lQ8R088 285 aaKnown RBP17.32■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 FosbP13346 338 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Gsdma3Q5Y4Y6 464 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Ifit1Q64282 463 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Gpatch3Q8BIY1 525 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Hoxc9P09633 260 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Limch1Q3UH68 1057 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Map3k2Q61083 619 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Ppp1r18Q8BQ30 594 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Tmem87aQ8BXN9 555 aa17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Hnrnpul1Q8VDM6 859 aaKnown RBP17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 StrbpQ91WM1 672 aaKnown RBP17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Ahnak2E9PYB0 1738 aaKnown RBP17.31■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Arhgef1Q61210 920 aaKnown RBP17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 TrhQ62361 256 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Map2P20357 1828 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Ets1P27577 440 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 XpcP51612 930 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Anp32eP97822 260 aaKnown RBP17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Znf532Q6NXK2 1036 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Pnpla2Q8BJ56 486 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Rhot2Q8JZN7 620 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Pik3c2aQ61194 1686 aa17.3■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 N4bp2F8VQG7 1678 aaKnown RBP17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Eif3aP23116 1344 aaKnown RBP17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Jakmip2D3YXK0 820 aa17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 NmiO35309 314 aa17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Bicc1Q99MQ1 977 aaKnown RBP17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 PhaxQ9JJT9 385 aaKnown RBP17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Sox12Q04890 314 aa17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Arglu1Q3UL36 271 aaKnown RBP17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Atp1a3Q6PIC6 1013 aa17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Rbm33Q9CXK9 1231 aaKnown RBP17.29■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Col16a1Q8BLX7 1580 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Tmem94Q7TSH8 1360 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Rgs12Q8CGE9 1381 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Lcmt1A0A0U1RNF2 332 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Ccdc121E9Q6D3 323 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Trap1aP19473 224 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Mkrn3Q60764 544 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Dnm3Q8BZ98 863 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Ddx27Q921N6 760 aaKnown RBP17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Xpo4Q9ESJ0 1151 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Kiaa0232Q80U59 1396 aaKnown RBP17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Aox2Q5SGK3 1345 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Irgm2A0A140LIF8 407 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Trak2Q6P9N8 913 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Smarcc2Q6PDG5 1213 aa17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Mrpl44Q9CY73 333 aaKnown RBP17.28■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Nup153E9Q3G8 1462 aaKnown RBP17.27■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Dnajc2P54103 621 aaKnown RBP17.27■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Mns1Q61884 491 aa17.27■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Morc2aQ69ZX6 1030 aa17.27■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Col4a3bpQ9EQG9 624 aa17.27■□□□□ 0.36
Ushbp1-201ENSMUST00000049184 Rad17Q6NXW6 688 aa17.27■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 Kiaa1524Q8BWY9 907 aa17.27■□□□□ 0.35
Ushbp1-201ENSMUST00000049184 4930504O13RikQ8C5Z9 145 aa17.27■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 22.7 ms