RNA–Protein interactions for RNA: ENSMUST00000047835.7

Scaf11-201, Transcript of SR-related CTD-associated factor 11, mousemouse

TSL 5 BASIC

Gene Scaf11, Length 5,766 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf11-201ENSMUST00000047835 Phf14Q9D4H9 881 aa21.18■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Tbc1d8bA3KGB4 1114 aa21.17■□□□□ 0.98
Scaf11-201ENSMUST00000047835 RestQ8VIG1 1082 aa21.17■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Xrcc4Q924T3 326 aa21.17■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Nsd3Q6P2L6 1439 aa21.17■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Mybbp1aQ7TPV4 1344 aaKnown RBP21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Snrpa1P57784 255 aaKnown RBP21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Eme2Q56A04 373 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Gm12185Q5NCB2 835 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Pdzd9Q9D9M4 266 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Epb41l3Q9WV92 929 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Cnnm2Q3TWN3 875 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Cnga2Q62398 664 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Ranbp6Q8BIV3 1105 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Rcan3Q9JKK0 239 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Rad50P70388 1312 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Dapk3O54784 448 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Hs2st1Q8R3H7 356 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Nap1l2P51860 460 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Lrrc43Q3V0L5 667 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Paxip1Q6NZQ4 1056 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Zkscan8Q8BSL0 588 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Hdac9Q99N13 588 aa21.16■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Rrbp1Q99PL5 1605 aaKnown RBP21.15■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Itga6Q61739 1091 aa21.15■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Ttc21aQ8C0S4 1314 aa21.15■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Rnf216P58283 853 aa21.15■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Ripply1Q2WG77 201 aa21.15■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Krt23Q99PS0 422 aa21.15■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Ddx10Q80Y44 875 aaKnown RBP21.14■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Ktn1Q61595 1327 aaKnown RBP21.14■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Cfap65Q3V0B4 1847 aa21.14■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Ift57Q8BXG3 429 aa21.14■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Eno4Q8C042 619 aa21.14■□□□□ 0.98
Scaf11-201ENSMUST00000047835 ParnQ8VDG3 624 aa21.14■□□□□ 0.98
Scaf11-201ENSMUST00000047835 SrrtQ99MR6 875 aaKnown RBP21.14■□□□□ 0.98
Scaf11-201ENSMUST00000047835 Sh3tc1G3X9F6 1346 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Sbno1Q689Z5 1390 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Kcnj4P52189 445 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Timm10P62073 90 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Klhl10Q9D5V2 608 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ak2Q9WTP6 239 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Trim30cD3YVI9 513 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Kcna6Q61923 529 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Dbndd1Q9CZ00 160 aa21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Pdcd6ipQ9WU78 869 aaKnown RBP21.14■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Aldh1l2Q8K009 923 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Mtmr3Q8K296 1196 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Stx1aO35526 288 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Lmbrd2Q8C561 694 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Col17a1Q07563 1470 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Baiap2l1Q9DBJ3 514 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Tekt3Q6X6Z7 490 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Srgap1Q91Z69 1062 aa21.13■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Dnaaf4Q8R368 420 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Naa16Q9DBB4 864 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Jakmip2D3YXK0 820 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ube2hP62257 183 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Tbc1d5Q80XQ2 815 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Synj2Q9D2G5 1434 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Mrps25Q9D125 171 aaKnown RBP21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Adam1aQ60813 791 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 TrhQ62361 256 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Rnf34Q99KR6 376 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Cavin1O54724 392 aa21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ccar2Q8VDP4 922 aaKnown RBP21.12■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Card10P58660 1021 aa21.11■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Nek11Q8C0Q4 628 aa21.11■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Lrriq1Q0P5X1 1673 aa21.11■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ifit2Q64112 472 aa21.11■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Mrps27Q8BK72 415 aaKnown RBP21.11■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Fchsd1Q6PFY1 688 aa21.1■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ncapg2Q6DFV1 1138 aa21.1■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Rbm17Q8JZX4 405 aaKnown RBP21.1■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Serpina10Q8R121 448 aa21.1■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Wdr17E9Q271 1322 aa21.1■□□□□ 0.97
Scaf11-201ENSMUST00000047835 AU022751B1B0V2 589 aa21.1■□□□□ 0.97
Scaf11-201ENSMUST00000047835 CltaO08585 235 aa21.1■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Sult6b1P0CC03 303 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ano2Q8CFW1 1002 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Frat2Q8K025 231 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Nucb1Q02819 459 aaKnown RBP21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ift122Q6NWV3 1182 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Smtnl1Q99LM3 459 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 TnksQ6PFX9 1320 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 TxlnbQ8VBT1 685 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Chaf1aQ9QWF0 911 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Foxo3Q9WVH4 672 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Fbf1A2A870 1173 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ccdc85cE9Q6B2 420 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ttll12Q3UDE2 639 aa21.09■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Znf608Q56A10 1511 aa21.08■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Mmp8O70138 465 aa21.08■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Ppp1r10Q80W00 888 aaKnown RBP21.08■□□□□ 0.97
Scaf11-201ENSMUST00000047835 Adcy5P84309 1262 aa21.08■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Ccdc181Q80ZU5 509 aa21.08■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Otud6bQ8K2H2 294 aa21.08■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Dctn1O08788 1281 aa21.08■□□□□ 0.96
Scaf11-201ENSMUST00000047835 SphkapQ6NSW3 1687 aa21.07■□□□□ 0.96
Scaf11-201ENSMUST00000047835 Ssrp1Q08943 708 aaKnown RBP21.07■□□□□ 0.96
Retrieved 100 of 22,080 RNA–protein pairs in 21.6 ms