RNA–Protein interactions for RNA: ENSMUST00000041639.6

Syne1-201, Transcript of Nesprin-1, mousemouse

TSL 1 (best) BASIC

Gene Syne1, Length 6,990 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Syne1-201ENSMUST00000041639 Exoc5Q3TPX4 708 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Psmd1Q3TXS7 953 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Exoc1Q8R3S6 894 aa11.22□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ttc12Q8BW49 704 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Farp2Q91VS8 1065 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Spocd1B1ASB6 936 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 E9QMW4 1145 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Atp2b3Q0VF55 1220 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ccdc148Q6P5U8 527 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Ndufa8Q9DCJ5 172 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 DlatQ8BMF4 642 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Gle1Q8R322 699 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 OvosQ3UU35 1456 aa11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Eif4g1Q6NZJ6 1600 aaKnown RBP11.21□□□□□ -0.61
Syne1-201ENSMUST00000041639 Atp7aQ64430 1491 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Nf2P46662 596 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Capza3P70190 299 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Tbc1d5Q80XQ2 815 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ttc5Q99LG4 440 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Zkscan4Q5SZT6 480 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Dennd3A2RT67 1274 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Fam186bD3Z420 943 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Fam160b2Q80YR2 744 aa11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 Yeats4Q9CR11 227 aaKnown RBP11.21□□□□□ -0.62
Syne1-201ENSMUST00000041639 AU022751B1B0V2 589 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Myl3P09542 204 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Mdm2P23804 489 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Fermt2Q8CIB5 680 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 GckrQ91X44 587 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 AI481877A2ALV5 1481 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Vamp4O70480 141 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Krt15Q61414 452 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Dzip1Q8BMD2 852 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Krt79Q8VED5 531 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ccdc94Q9D6J3 314 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 RestQ8VIG1 1082 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 DroshaQ5HZJ0 1373 aaKnown RBP11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Specc1Q5SXY1 1067 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Pdzrn3Q69ZS0 1063 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Zfp853A0A1D5RM95 733 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Luc7l2Q7TNC4 392 aaKnown RBP11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 StambpQ9CQ26 424 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ak2Q9WTP6 239 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Znf394Q9Z1D9 521 aa11.2□□□□□ -0.62
Syne1-201ENSMUST00000041639 Asic1Q6NXK8 526 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Tti2Q8BGV4 512 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Tmx3Q8BXZ1 456 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Myo1bP46735 1107 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Spata24Q6P926 205 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Fez2Q6TYB5 348 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Efcab2Q9CQ46 164 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Haus2Q9CQS9 234 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Sycp2lA0A0M3U1B0 842 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Zc3h12cQ5DTV4 884 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ifit2Q64112 472 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Frat2Q8K025 231 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Acot9Q9R0X4 439 aaKnown RBP11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Cnnm2Q3TWN3 875 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ccdc82Q6PG04 518 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Akr1c19G3X9Y6 323 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Top1Q04750 767 aaKnown RBP11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ccdc42Q5SV66 316 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gas8Q60779 478 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Tmem143Q8VD26 458 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Taf7Q9R1C0 341 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Eif4a2P10630 407 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 L1td1Q587J6 782 aaKnown RBP11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Paip2Q9D6V8 124 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Egfl6Q9JJZ5 550 aa11.19□□□□□ -0.62
Syne1-201ENSMUST00000041639 Cyb5rlB1AS42 316 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gas2l2Q5SSG4 860 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gm28919A0A087WP35 240 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Prim1P20664 417 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Zbtb45Q52KG4 520 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 SfpqQ8VIJ6 699 aaKnown RBP11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Rufy3Q9D394 469 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Grin2aP35436 1464 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Neurog2P70447 263 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Gm7347D3YYI9 267 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Nsrp1Q5NCR9 542 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Abtb2Q7TQI7 1024 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Rapgef3Q8VCC8 918 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 MthfsQ9D110 203 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Setdb1O88974 1307 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Fbln2P37889 1221 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Znf697Q569E7 569 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 GlmnQ8BZM1 596 aa11.18□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ppfibp2O35711 882 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Hoxb7P09024 217 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Uso1Q9Z1Z0 959 aaKnown RBP11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Rapgef6Q5NCJ1 1609 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ankrd26Q811D2 1581 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Speer4aF8VPX6 267 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Psmb7P70195 277 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Terf1P70371 421 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Acnat2Q8BGG9 420 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ier5O89113 308 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Il4rP16382 810 aa11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 MarcksP26645 309 aaKnown RBP11.17□□□□□ -0.62
Syne1-201ENSMUST00000041639 Ncf1Q09014 390 aa11.17□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 85 ms