RNA–Protein interactions for RNA: ENSMUST00000036229.12

Ctdp1-201, Transcript of RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdp1, Length 3,713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1-201ENSMUST00000036229 Ccne1Q61457 408 aa16.94■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ttc27Q8CD92 847 aa16.94■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Prpf4bQ61136 1007 aaKnown RBP16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ctdp1Q7TSG2 960 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Cbx8Q9QXV1 362 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Cplx1P63040 134 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ncoa7Q6DFV7 943 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Slc20a2Q80UP8 656 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Tmc2Q8R4P4 888 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Sf3a3Q9D554 501 aaKnown RBP16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 PdclQ9DBX2 301 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Kif24Q6NWW5 1356 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Rad50P70388 1312 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 GmnnO88513 206 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 AppP12023 770 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Q32P12 615 aa16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ddx49Q4FZF3 480 aaKnown RBP16.93■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 PtprtQ99M80 1454 aa16.92■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ddx58Q6Q899 926 aa16.92■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Cgref1Q8R1U2 281 aa16.92■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Stk11Q9WTK7 436 aa16.92■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Zap70P43404 618 aa16.92■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 SelenooQ9DBC0 667 aa16.92■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Pola1P33609 1465 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Pik3r4Q8VD65 1358 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Cfap99A0A140LIX9 648 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ppfia1B2RXQ2 1266 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Gcom1E9PZ54 550 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Mmp8O70138 465 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 MyzapQ3UIJ9 466 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Golph3lQ8R088 285 aaKnown RBP16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Slc26a8Q8R0C3 999 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ap1g2O88512 791 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ms4a1P19437 291 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Acbd5Q5XG73 508 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Foxd1Q61345 456 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Vps33aQ9D2N9 598 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ak2Q9WTP6 239 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Cep170Q6A065 1588 aa16.91■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Mdm2P23804 489 aa16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ctr9Q62018 1173 aaKnown RBP16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ehd2Q8BH64 543 aa16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Tpcn1Q9EQJ0 817 aa16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 AnkarA2RT91 1465 aa16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Ccdc112A0AUP1 442 aa16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Cep112Q5PR68 954 aa16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Synpo2Q91YE8 1087 aaKnown RBP16.9■□□□□ 0.3
Ctdp1-201ENSMUST00000036229 Kifc2O08672 792 aa16.89■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Cabp4Q8VHC5 271 aa16.89■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Mcmdc2E9Q956 681 aa16.89■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Kif3cO35066 796 aa16.89■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Usp28Q5I043 1051 aa16.89■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Gps2Q921N8 327 aa16.89■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Stat1P42225 749 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 FanccP50652 591 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ppp1r7Q3UM45 361 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 CenphQ9QYM8 241 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Tbc1d4Q8BYJ6 1307 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 PaskQ8CEE6 1383 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Clec11aO88200 328 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Pms1Q8K119 917 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Atp8b2P98199 1209 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Tsen34Q8BMZ5 316 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Fam53cQ8BXQ8 393 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Matr3Q8K310 846 aaKnown RBP16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Cdc42bpbQ7TT50 1713 aa16.88■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 1700006A11RikB9EHI3 544 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Gm10471E9Q1C7 252 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Nphp3Q7TNH6 1325 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Afap1Q80YS6 731 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Rsph4aQ8BYM7 716 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Zfp113Q8C689 439 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Usp27Q8CEG8 438 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ccdc7Q9D541 371 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Klhl30Q8C3F7 581 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Nat10Q8K224 1024 aaKnown RBP16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 KynuQ9CXF0 464 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ap3b2Q9JME5 1082 aa16.87■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 OvosQ3UU35 1456 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Bbof1Q3V079 533 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Panx2Q6IMP4 677 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ccdc158Q8CDI6 1109 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ppp4r3bQ922R5 820 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Setd1aE9PYH6 1716 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Orc1Q9Z1N2 840 aaKnown RBP16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Abca8bQ8K440 1620 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Cep63Q3UPP8 700 aa16.86■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 CalrP14211 416 aaKnown RBP16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Larp1Q6ZQ58 1072 aaKnown RBP16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Cep120Q7TSG1 988 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ppfibp1Q8C8U0 969 aaKnown RBP16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Aldh1l2Q8K009 923 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Hip1rQ9JKY5 1068 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Atp12aQ9Z1W8 1035 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Eif3aP23116 1344 aaKnown RBP16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Slc1a4O35874 532 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 H2afxP27661 143 aaKnown RBP16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ovgp1Q62010 721 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Ugt1a5B2RT14 529 aa16.85■□□□□ 0.29
Ctdp1-201ENSMUST00000036229 Rufy1Q8BIJ7 712 aa16.85■□□□□ 0.29
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms