RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Cyp7a1Q64505 503 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Srgap1Q91Z69 1062 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Sik1Q60670 779 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Hspa4Q61316 841 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Bloc1s4Q8VED2 215 aa11.51□□□□□ -0.57
Ldlr-201ENSMUST00000034713 LyarQ08288 388 aaKnown RBP11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ttc5Q99LG4 440 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Snw1Q9CSN1 536 aaKnown RBP11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Adamts7Q68SA9 1657 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Lrrc43Q3V0L5 667 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Jakmip3Q5DTN8 844 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Luzp1Q8R4U7 1068 aaKnown RBP11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Brms1Q99N20 246 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Kiaa1107Q80TK0 1369 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Xrn1P97789 1719 aaKnown RBP11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Gas2l3Q3UWW6 683 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Larp1Q6ZQ58 1072 aaKnown RBP11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 SympkQ80X82 1284 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Grpel1Q99LP6 217 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 FanclQ9CR14 375 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Asic4Q7TNS7 539 aa11.5□□□□□ -0.57
Ldlr-201ENSMUST00000034713 TnrQ8BYI9 1358 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Atp8b2P98199 1209 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Fam213aQ9CYH2 218 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Plekho1Q9JIY0 408 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cdk12Q14AX6 1484 aaKnown RBP11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Spty2d1Q68FG3 682 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ano10Q8BH79 659 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Pdcd11Q6NS46 1862 aaKnown RBP11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Slc7a3P70423 618 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Gemin5Q8BX17 1502 aaKnown RBP11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cdhr2E9Q7P9 1308 aa11.49□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Abl1P00520 1123 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Stat1P42225 749 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Tubb4bP68372 445 aaKnown RBP11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Prkab2Q6PAM0 271 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Smc1bQ920F6 1248 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Chd1lQ9CXF7 900 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Usp19Q3UJD6 1360 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Kif2aP28740 705 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 TbcaP48428 108 aaKnown RBP11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 VeztQ3ZK22 780 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Brinp3Q499E0 766 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Trim25Q61510 634 aaKnown RBP11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cfap69Q8BH53 942 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cep55Q8BT07 462 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Mrpl44Q9CY73 333 aaKnown RBP11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Dip2aQ8BWT5 1523 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 CemipQ8BI06 1361 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Psrc1Q9D0P7 329 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Nsd3Q6P2L6 1439 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cnksr1A2A9K7 700 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Snap23O09044 210 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Cep131Q62036 1060 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Rad50P70388 1312 aa11.48□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ccdc121E9Q6D3 323 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Atp8b3Q6UQ17 1335 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ccdc112A0AUP1 442 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ncbp1Q3UYV9 790 aaKnown RBP11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Polr3dQ91WD1 398 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Bicc1Q99MQ1 977 aaKnown RBP11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Speer4dL7N216 212 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 CenphQ9QYM8 241 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Itsn2Q9Z0R6 1659 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Setd1aE9PYH6 1716 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Gm45015A0A140LII9 184 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Gm18336A0A140LIU8 765 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Ampd3O08739 766 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Eif4a1P60843 406 aaKnown RBP11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Tbc1d8Q9Z1A9 1134 aa11.47□□□□□ -0.57
Ldlr-201ENSMUST00000034713 AU019823E9PUQ3 292 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Il4rP16382 810 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Sycp1Q62209 993 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 RgmbQ7TQ33 436 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 RtcbQ99LF4 505 aaKnown RBP11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Iqca1Q9CUL5 857 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Irx4Q9QY61 515 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Rreb1Q3UH06 1700 aaKnown RBP11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Gm12185Q5NCB2 835 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 PtprmP28828 1452 aa11.46□□□□□ -0.57
Ldlr-201ENSMUST00000034713 Mcmdc2E9Q956 681 aa11.46□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Gm42641I6L9G2 585 aa11.46□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Nap1l2P51860 460 aa11.46□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Vgll3P85442 326 aa11.46□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Snx13Q6PHS6 957 aa11.46□□□□□ -0.58
Ldlr-201ENSMUST00000034713 AtripQ8BMG1 785 aa11.46□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ppp4r3bQ922R5 820 aa11.46□□□□□ -0.58
Ldlr-201ENSMUST00000034713 GmnnO88513 206 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Slc13a4Q8BZ82 625 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Zbtb22Q9Z0G7 638 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Abca17E9PX95 1733 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Zfp251Q6PCX8 632 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Taok3Q8BYC6 898 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Brd3Q8K2F0 726 aaKnown RBP11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Klf15Q9EPW2 415 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Nid2O88322 1403 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Ppp4r3aQ6P2K6 820 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Erlin1Q91X78 346 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Slx4ipQ9D7Y9 413 aa11.45□□□□□ -0.58
Ldlr-201ENSMUST00000034713 Jdp2P97875 163 aa11.45□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms