RNA–Protein interactions for RNA: ENSMUST00000034245.15

Usb1-201, Transcript of U6 snRNA phosphodiesterase, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Usb1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1-201ENSMUST00000034245 Fbxo3Q9DC63 480 aa20.38■□□□□ 0.85
Usb1-201ENSMUST00000034245 Ubr3Q5U430 1889 aa20.38■□□□□ 0.85
Usb1-201ENSMUST00000034245 Pdia3P27773 505 aaKnown RBP20.37■□□□□ 0.85
Usb1-201ENSMUST00000034245 DbnlQ62418 436 aa20.37■□□□□ 0.85
Usb1-201ENSMUST00000034245 Zkscan8Q8BSL0 588 aa20.37■□□□□ 0.85
Usb1-201ENSMUST00000034245 Rhot2Q8JZN7 620 aa20.37■□□□□ 0.85
Usb1-201ENSMUST00000034245 Kif2cQ922S8 721 aa20.37■□□□□ 0.85
Usb1-201ENSMUST00000034245 Bin2D3Z6Q9 489 aa20.36■□□□□ 0.85
Usb1-201ENSMUST00000034245 Plbd2Q3TCN2 594 aa20.36■□□□□ 0.85
Usb1-201ENSMUST00000034245 Tbc1d32Q3URV1 1296 aa20.36■□□□□ 0.85
Usb1-201ENSMUST00000034245 Prdm11A2AGX3 565 aa20.36■□□□□ 0.85
Usb1-201ENSMUST00000034245 Anxa1P10107 346 aaKnown RBP20.36■□□□□ 0.85
Usb1-201ENSMUST00000034245 Tmem266Q8BZB3 538 aa20.36■□□□□ 0.85
Usb1-201ENSMUST00000034245 Gja10Q9WUS4 505 aa20.36■□□□□ 0.85
Usb1-201ENSMUST00000034245 Ube4aE9Q735 1028 aa20.35■□□□□ 0.85
Usb1-201ENSMUST00000034245 Timm10P62073 90 aa20.35■□□□□ 0.85
Usb1-201ENSMUST00000034245 Brf1Q8CFK2 676 aa20.35■□□□□ 0.85
Usb1-201ENSMUST00000034245 Kif23E9Q5G3 953 aa20.34■□□□□ 0.85
Usb1-201ENSMUST00000034245 Wdhd1P59328 1117 aa20.34■□□□□ 0.85
Usb1-201ENSMUST00000034245 Rgs17Q9QZB0 210 aa20.34■□□□□ 0.85
Usb1-201ENSMUST00000034245 Msl1Q6PDM1 616 aa20.34■□□□□ 0.85
Usb1-201ENSMUST00000034245 CpzQ8R4V4 654 aa20.34■□□□□ 0.85
Usb1-201ENSMUST00000034245 Col11a2Q64739 1736 aa20.33■□□□□ 0.84
Usb1-201ENSMUST00000034245 Nucb1Q02819 459 aaKnown RBP20.33■□□□□ 0.84
Usb1-201ENSMUST00000034245 VeztQ3ZK22 780 aa20.33■□□□□ 0.84
Usb1-201ENSMUST00000034245 Ppp6r3Q922D4 844 aa20.33■□□□□ 0.84
Usb1-201ENSMUST00000034245 Nphp3Q7TNH6 1325 aa20.32■□□□□ 0.84
Usb1-201ENSMUST00000034245 Pde8bE9Q4S1 865 aa20.32■□□□□ 0.84
Usb1-201ENSMUST00000034245 Hsp90b1P08113 802 aaKnown RBP20.32■□□□□ 0.84
Usb1-201ENSMUST00000034245 Atp2b3Q0VF55 1220 aa20.32■□□□□ 0.84
Usb1-201ENSMUST00000034245 Unc5clQ6R653 518 aa20.32■□□□□ 0.84
Usb1-201ENSMUST00000034245 Asap2Q7SIG6 958 aa20.32■□□□□ 0.84
Usb1-201ENSMUST00000034245 St5Q924W7 1134 aa20.32■□□□□ 0.84
Usb1-201ENSMUST00000034245 Sh3tc1G3X9F6 1346 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Myo3bQ1EG27 1305 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 1700029H14RikE9PY36 240 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Rab3gap1Q80UJ7 981 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Sde2Q8K1J5 448 aaKnown RBP20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Ipo9Q91YE6 1041 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Stk3Q9JI10 497 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Gm7347D3YYI9 267 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Speer4aF8VPX6 267 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 TsksO54887 585 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Zbtb45Q52KG4 520 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Tmem143Q8VD26 458 aa20.31■□□□□ 0.84
Usb1-201ENSMUST00000034245 Speer4dL7N216 212 aa20.3■□□□□ 0.84
Usb1-201ENSMUST00000034245 1810065E05RikQ5NC41 235 aa20.3■□□□□ 0.84
Usb1-201ENSMUST00000034245 Rbm5Q91YE7 815 aaKnown RBP20.3■□□□□ 0.84
Usb1-201ENSMUST00000034245 CalcaP70160 136 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Strip1Q8C079 837 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Krt25Q8VCW2 446 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Lrp5Q91VN0 1614 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Aknad1E9Q8N6 675 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Plekhf1Q3TB82 279 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Prune1Q8BIW1 454 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Chrna2Q91X60 512 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Il1rapl2Q9ERS6 686 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Kcnq5Q9JK45 933 aa20.29■□□□□ 0.84
Usb1-201ENSMUST00000034245 Kiaa0753Q6A000 959 aa20.28■□□□□ 0.84
Usb1-201ENSMUST00000034245 Ift57Q8BXG3 429 aa20.28■□□□□ 0.84
Usb1-201ENSMUST00000034245 Znf609Q8BZ47 1413 aa20.28■□□□□ 0.84
Usb1-201ENSMUST00000034245 Rps8P62242 208 aaKnown RBP20.27■□□□□ 0.84
Usb1-201ENSMUST00000034245 Rdm1Q9CQK3 281 aa20.27■□□□□ 0.84
Usb1-201ENSMUST00000034245 Naa16Q9DBB4 864 aa20.27■□□□□ 0.84
Usb1-201ENSMUST00000034245 Adarb2Q9JI20 745 aa20.27■□□□□ 0.84
Usb1-201ENSMUST00000034245 Rbbp8nlA2ABX0 614 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Nol8Q3UHX0 1147 aaKnown RBP20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ppm1gQ61074 542 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ppip5k2Q6ZQB6 1129 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Slc39a11Q8BWY7 342 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Riok1Q922Q2 567 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ppil4Q9CXG3 492 aaKnown RBP20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Sh3bp5Q9Z131 463 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Slc4a1P04919 929 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Dydc2Q9D3X8 139 aa20.26■□□□□ 0.83
Usb1-201ENSMUST00000034245 Col3a1P08121 1464 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ambra1A2AH22 1300 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 Sned1Q70E20 1403 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 Slurp2P0DP59 97 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 GabrdP22933 449 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 Sept1P42209 366 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 EspnlQ3UYR4 1005 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 Vps54Q5SPW0 977 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 GorabQ8BRM2 368 aa20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 McamQ8R2Y2 648 aaKnown RBP20.25■□□□□ 0.83
Usb1-201ENSMUST00000034245 Gm4340L7N2C4 268 aa20.24■□□□□ 0.83
Usb1-201ENSMUST00000034245 Atxn2lQ7TQH0 1049 aaKnown RBP20.24■□□□□ 0.83
Usb1-201ENSMUST00000034245 Col23a1Q8K4G2 532 aa20.24■□□□□ 0.83
Usb1-201ENSMUST00000034245 Rabep1O35551 862 aa20.23■□□□□ 0.83
Usb1-201ENSMUST00000034245 Znf496Q5SXI5 585 aa20.23■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ezh2Q61188 746 aaKnown RBP20.23■□□□□ 0.83
Usb1-201ENSMUST00000034245 Fam160b2Q80YR2 744 aa20.23■□□□□ 0.83
Usb1-201ENSMUST00000034245 OscarQ8VBT3 265 aa20.23■□□□□ 0.83
Usb1-201ENSMUST00000034245 Oas2E9Q9A9 742 aa20.23■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ccne2Q9Z238 404 aa20.23■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ppfia1B2RXQ2 1266 aa20.22■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ccdc85cE9Q6B2 420 aa20.22■□□□□ 0.83
Usb1-201ENSMUST00000034245 Il15P48346 162 aa20.22■□□□□ 0.83
Usb1-201ENSMUST00000034245 IntuQ059U7 942 aa20.22■□□□□ 0.83
Usb1-201ENSMUST00000034245 Ddx11Q6AXC6 880 aa20.22■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms