RNA–Protein interactions for RNA: ENSMUST00000033158.5

Ubfd1-201, Transcript of Ubiquitin domain-containing protein UBFD1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubfd1, Length 4,849 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1-201ENSMUST00000033158 Erlin1Q91X78 346 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Smco2Q9DA21 347 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Fam135bQ9DAI6 1403 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ssrp1Q08943 708 aaKnown RBP19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Exoc8Q6PGF7 716 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Naa15Q80UM3 865 aaKnown RBP19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 ThemisQ8BGW0 636 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ccdc73Q8CDM4 1066 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Esyt1Q3U7R1 1092 aaKnown RBP19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ranbp6Q8BIV3 1105 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ccdc12Q8R344 166 aaKnown RBP19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Lman1Q9D0F3 517 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ak2Q9WTP6 239 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Abcc6Q9R1S7 1498 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Adgrb2Q8CGM1 1561 aa19.01■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Cetn1P41209 172 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Pde1cQ64338 706 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 PalldQ9ET54 1408 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 GnaqP21279 359 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 CebpzP53569 1052 aaKnown RBP19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Lmod1Q8BVA4 595 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Bloc1s4Q8VED2 215 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ifit2Q64112 472 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Fam170aQ66LM6 333 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ankrd13dQ6PD24 605 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Tti2Q8BGV4 512 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Krt79Q8VED5 531 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Pik3ap1Q9EQ32 811 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Akap2O54931 893 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Gas2l2Q5SSG4 860 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Cfap53Q9D439 514 aa19■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Asxl2Q8BZ32 1370 aa18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Tom1O88746 492 aa18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Sptlc2P97363 560 aaKnown RBP18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 RragbQ6NTA4 374 aa18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Chd1lQ9CXF7 900 aa18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Pdzrn3Q69ZS0 1063 aa18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ift122Q6NWV3 1182 aa18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Rufy3Q9D394 469 aa18.99■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Nop53Q8BK35 484 aaKnown RBP18.98■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Brd3Q8K2F0 726 aaKnown RBP18.98■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Klhl30Q8C3F7 581 aa18.98■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Syt10Q9R0N4 523 aa18.98■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ift88Q61371 824 aa18.98■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Dydc2Q9D3X8 139 aa18.98■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Atp8b3Q6UQ17 1335 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Tyro3P55144 880 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Terf1P70371 421 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Arglu1Q3UL36 271 aaKnown RBP18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Serpina10Q8R121 448 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Prrc2bQ7TPM1 1486 aaKnown RBP18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ncf1Q09014 390 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Znf518aB2RRF6 1478 aaKnown RBP18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ctage5Q8R311 779 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 BrapQ99MP8 591 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Dph6Q9CQ28 267 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Letm1Q9Z2I0 738 aa18.97■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Gadd45bP22339 160 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Sun3Q5SS91 320 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Sycp2lA0A0M3U1B0 842 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 NpcdF8VQB8 469 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Mmp8O70138 465 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Gjc1P28229 396 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Jarid2Q62315 1234 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Hoxc9P09633 260 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Ctnnbl1Q9CWL8 563 aaKnown RBP18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Dennd4bQ3U1Y4 1499 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Adgrl2Q8JZZ7 1487 aa18.96■□□□□ 0.63
Ubfd1-201ENSMUST00000033158 Hook3Q8BUK6 718 aa18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Gdpd2Q9ESM6 539 aa18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 PtprgQ05909 1442 aa18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Supt6hQ62383 1726 aaKnown RBP18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Map2k1P31938 393 aa18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Gnat2P50149 354 aa18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Matr3Q8K310 846 aaKnown RBP18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Map3k19E9Q3S4 1311 aa18.95■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Edc4Q3UJB9 1406 aaKnown RBP18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Zfp42P22227 288 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Tax1bp1Q3UKC1 814 aaKnown RBP18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Zkscan16A2ALW2 728 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Abtb2Q7TQI7 1024 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ankrd40Q5SUE8 363 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 St5Q924W7 1134 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 AmfrQ9R049 643 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Nsd3Q6P2L6 1439 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Talpid3E9PV87 1520 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Kdm3bQ6ZPY7 1562 aa18.94■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Cfap74Q3UY96 1578 aa18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Cdk13Q69ZA1 1511 aaKnown RBP18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ercc3P49135 783 aa18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Bbof1Q3V079 533 aa18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Haus2Q9CQS9 234 aa18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ndufa8Q9DCJ5 172 aa18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Prpf40aQ9R1C7 953 aaKnown RBP18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Calm1P0DP26 149 aaKnown RBP18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Calm2P0DP27 149 aaKnown RBP18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Calm3P0DP28 149 aaKnown RBP18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Kifc2O08672 792 aa18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Ccdc82Q6PG04 518 aa18.93■□□□□ 0.62
Ubfd1-201ENSMUST00000033158 Rtn1Q8K0T0 780 aa18.93■□□□□ 0.62
Retrieved 100 of 22,080 RNA–protein pairs in 17 ms