RNA–Protein interactions for RNA: ENSMUST00000029414.11

Ssr3-201, Transcript of Translocon-associated protein subunit gamma, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssr3, Length 2,957 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr3-201ENSMUST00000029414 Rbm46P86049 533 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 EappQ5BU09 281 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ttc19Q8CC21 365 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Dydc2Q9D3X8 139 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Heg1E9Q7X6 1337 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Chrna5Q2MKA5 467 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Zbtb38Q3LR78 1197 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Znf692Q3U381 531 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Stxbp5lQ5DQR4 1185 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ccdc60Q8C4J0 545 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Scn11aQ9R053 1765 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ppp4r2Q0VGB7 417 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Cavin2Q63918 418 aaKnown RBP10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Trim26Q99PN3 545 aa10.11□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Mphosph10Q810V0 681 aaKnown RBP10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Myoz2Q9JJW5 264 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Col1a1P11087 1453 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Trim34bJ3QNR8 485 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 NfixP70257 488 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 SobpQ0P5V2 864 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Zfp444Q3TDV8 331 aaKnown RBP10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Best3Q6H1V1 669 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Lmbr1lQ9D1E5 489 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Lgr5Q9Z1P4 907 aa10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Nup98Q6PFD9 1816 aaKnown RBP10.1□□□□□ -0.79
Ssr3-201ENSMUST00000029414 NinQ61043 2035 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Znfx1Q8R151 1909 aaKnown RBP10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 BcanQ61361 883 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Bend3Q6PAL0 825 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Map3k15A2AQW0 1331 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 NrapQ80XB4 1728 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Slc4a9E9PUP3 929 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Aifm3Q3TY86 605 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Plekhm2Q80TQ5 1018 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Ly6iQ9WU67 134 aa10.09□□□□□ -0.79
Ssr3-201ENSMUST00000029414 Glt1d1A4FUP9 346 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Atp6v1aP50516 617 aaKnown RBP10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Irx3P81067 507 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Psmd1Q3TXS7 953 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Gja3Q64448 417 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 MarsQ68FL6 902 aaKnown RBP10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Glis2Q8VDL9 521 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Kif2cQ922S8 721 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Dcdc2bF7BCK0 340 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Rps8P62242 208 aaKnown RBP10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Rimbp2Q80U40 1072 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Kiaa0232Q80U59 1396 aaKnown RBP10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Plekhg6Q8R0J1 787 aa10.08□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Eif6O55135 245 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 G3bp1P97855 465 aaKnown RBP10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 DaglaQ6WQJ1 1044 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 HlfQ8BW74 295 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Naa16Q9DBB4 864 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Eddm13E9Q7F5 164 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Zap70P43404 618 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Bend4P86174 541 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Skor1Q8BX46 964 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Gdf11Q9Z1W4 405 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Carmil3Q3UFQ8 1375 aa10.07□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Nectin2P32507 530 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 McamQ8R2Y2 648 aaKnown RBP10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Myh15E9Q264 1925 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Col3a1P08121 1464 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Peak1Q69Z38 1735 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 PnnO35691 725 aaKnown RBP10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Rangap1P46061 589 aaKnown RBP10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Map9Q3TRR0 646 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Tshz2Q68FE9 1030 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Polr3glQ8R0C0 218 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 PdgfdQ925I7 370 aa10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 AfdnQ9QZQ1 1820 aaKnown RBP10.06□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Map3k13Q1HKZ5 959 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 VeztQ3ZK22 780 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Itga6Q61739 1091 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Tmco5bQ80X59 307 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Popdc2Q9ES82 367 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Grm8P47743 908 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Ccdc93Q7TQK5 629 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Slc39a11Q8BWY7 342 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Slfn1Q9Z0I7 337 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Pcdh15Q99PJ1 1943 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Eif3aP23116 1344 aaKnown RBP10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Cfdp1O88271 295 aaKnown RBP10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Podxl2Q8CAE9 603 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Slc51aQ8R000 340 aa10.05□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Nolc1E9Q5C9 702 aaKnown RBP10.04□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Ube4aE9Q735 1028 aa10.04□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Gnat3Q3V3I2 354 aa10.04□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Tom1l2Q5SRX1 507 aa10.04□□□□□ -0.8
Ssr3-201ENSMUST00000029414 NexnQ7TPW1 607 aa10.04□□□□□ -0.8
Ssr3-201ENSMUST00000029414 1700029H14RikE9PY36 240 aa10.04□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Snrpa1P57784 255 aaKnown RBP10.04□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Upf2A2AT37 1269 aaKnown RBP10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Il15P48346 162 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Nol10Q5RJG1 687 aaKnown RBP10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Glis3Q6XP49 780 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Ric3Q8BPM6 367 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Smc4Q8CG47 1286 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Ubxn2aQ99KJ0 258 aa10.03□□□□□ -0.8
Ssr3-201ENSMUST00000029414 Armcx1Q9CX83 456 aa10.03□□□□□ -0.8
Retrieved 100 of 22,080 RNA–protein pairs in 12.3 ms