RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 IntuQ059U7 942 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Erc1Q99MI1 1120 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Cyp27a1Q9DBG1 533 aa9.35□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Atp1b3P97370 278 aa9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Srp68Q8BMA6 625 aaKnown RBP9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 AidaQ8C4Q6 305 aa9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Ak2Q9WTP6 239 aa9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 TnksQ6PFX9 1320 aa9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Phlpp1Q8CHE4 1687 aa9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Cyp19a1P28649 503 aa9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 MpndQ3TV65 487 aa9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 RtcbQ99LF4 505 aaKnown RBP9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 LlphQ9D945 130 aaKnown RBP9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Psma5Q9Z2U1 241 aaKnown RBP9.34□□□□□ -0.91
Ccdc39-201ENSMUST00000029222 Arfgef2A2A5R2 1792 aa9.34□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Agtpbp1Q641K1 1218 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Pdzrn3Q69ZS0 1063 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Msl1Q6PDM1 616 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Susd4Q8BH32 490 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tktl2Q9D4D4 627 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tns2Q8CGB6 1400 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 NpeppsQ11011 920 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Rbm27Q5SFM8 1060 aaKnown RBP9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tmem266Q8BZB3 538 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Col18a1P39061 1774 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Dnajc2P54103 621 aaKnown RBP9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 NfkbibQ60778 359 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tmc2Q8R4P4 888 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 IncenpQ9WU62 880 aa9.33□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Gm13023A2A8N2 498 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Bin2D3Z6Q9 489 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 TsksO54887 585 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Lrrc43Q3V0L5 667 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Pla2g4fQ50L41 855 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Kiaa0753Q6A000 959 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Mrps27Q8BK72 415 aaKnown RBP9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Lrrfip2Q91WK0 415 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Cdca7lQ922M5 438 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 SfswapQ3USH5 945 aaKnown RBP9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Cchcr1Q8K2I2 770 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Crb1Q8VHS2 1405 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Rad50P70388 1312 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 SlkO54988 1233 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Hoxa7P02830 229 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Fbln2P37889 1221 aa9.32□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 PtprvP70289 1705 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Rasa1E9PYG6 1038 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Speer4dL7N216 212 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Cct2P80314 535 aaKnown RBP9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Casc1Q6TDU8 730 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Ufl1Q8CCJ3 793 aaKnown RBP9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Zcrb1Q9CZ96 217 aaKnown RBP9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Klf15Q9EPW2 415 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Foxo3Q9WVH4 672 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Gm7347D3YYI9 267 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Speer4aF8VPX6 267 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Snrpa1P57784 255 aaKnown RBP9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Nlrp1aQ2LKU9 1182 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tti2Q8BGV4 512 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 HmcesQ8R1M0 353 aaKnown RBP9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Pet2A2AHY8 747 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Ugt1a5B2RT14 529 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Nlrp9aQ66X03 949 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Ppm1fQ8CGA0 452 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Atf7Q8R0S1 413 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Slc14a2Q8R4T9 930 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Bloc1s4Q8VED2 215 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 PtmsQ9D0J8 101 aaKnown RBP9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 ParvgQ9ERD8 331 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tbc1d8Q9Z1A9 1134 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Ccne2Q9Z238 404 aa9.31□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Atg9aQ68FE2 551 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Rbm26Q6NZN0 1012 aaKnown RBP9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tsr2Q8C8T8 191 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Pms1Q8K119 917 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Dnttip2Q8R2M2 758 aaKnown RBP9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Scn7aB1AYL1 1681 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Unc13bQ9Z1N9 1602 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tnni2P13412 182 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Fsd1Q7TPM6 496 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Anapc15P60007 132 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Kank4Q6P9J5 1016 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Ccdc158Q8CDI6 1109 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 NsmfQ99NF2 532 aa9.3□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Zbtb21E9Q444 1094 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Nek11Q8C0Q4 628 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Ehd4Q9EQP2 541 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 GakQ99KY4 1305 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Prl7a2O54831 253 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Fam160b2Q80YR2 744 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Bag4Q8CI61 457 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Kcnq3Q8K3F6 873 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Kdm4cQ8VCD7 1054 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Riok1Q922Q2 567 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Rdm1Q9CQK3 281 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Tlr8P58682 1032 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Ppp1r21Q3TDD9 780 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Trim56Q80VI1 734 aaKnown RBP9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 Cfap69Q8BH53 942 aa9.29□□□□□ -0.92
Ccdc39-201ENSMUST00000029222 EngaseQ8BX80 734 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 19 ms