RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Crocc2F6XLV1 1638 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 IqcdQ9D3V1 458 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Gm1043A0A140LJC2 1431 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Dapk3O54784 448 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 SfswapQ3USH5 945 aaKnown RBP15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ppp1r42Q8R1Z4 357 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Spg7Q3ULF4 781 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Bag3Q9JLV1 577 aaKnown RBP15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Speer3W4VSP1 261 aa15.81■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Gm7347D3YYI9 267 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Sem1P60897 70 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ppfia2Q8BSS9 1257 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 NexmifQ5DTT1 1515 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Fam186bD3Z420 943 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ccdc114Q3UX62 658 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 HnrnpmQ9D0E1 729 aaKnown RBP15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ccdc124Q9D8X2 217 aaKnown RBP15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 NgdnQ9DB96 315 aaKnown RBP15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 GpkowQ56A08 488 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Mroh2bQ7M6Y6 1581 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Vps52Q8C754 723 aaKnown RBP15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Cyp4f39Q8BGU0 532 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Atf7Q8R0S1 413 aa15.8■□□□□ 0.12
Col5a1-201ENSMUST00000028280 B4galnt4Q766D5 1034 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Top2bQ64511 1612 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Prr16A3KMN5 304 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Gpr161B2RPY5 545 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ppp1r15aP17564 657 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Zbtb16Q3UQ17 673 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Drc1Q3USS3 753 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Hs2st1Q8R3H7 356 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Samd15F6XZJ7 620 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Prkar2bP31324 416 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Slc52a2Q9D8F3 450 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Egfl6Q9JJZ5 550 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Capza3P70190 299 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Tmed1Q3V009 227 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Exoc1Q8R3S6 894 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Kcnh5Q920E3 988 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ubxn1Q922Y1 297 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ddx24Q9ESV0 857 aaKnown RBP15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 EvcP57680 1005 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Syt10Q9R0N4 523 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Capn2O08529 700 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 S100bP50114 92 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ttc5Q99LG4 440 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Haus2Q9CQS9 234 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Polr3dQ91WD1 398 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Vps16Q920Q4 839 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Homer2Q9QWW1 354 aa15.79■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Serpinc1P32261 465 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Stim2P83093 746 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Xab2Q9DCD2 855 aaKnown RBP15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Ttc21aQ8C0S4 1314 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Nub1P54729 614 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Rsph3bQ9DA80 389 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Diaph2O70566 1098 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Dzip1lQ499E4 774 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 PrxO55103 1391 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Tbc1d7Q9D0K0 293 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Krt79Q8VED5 531 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Phlpp2Q8BXA7 1320 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Epb41l2O70318 988 aaKnown RBP15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Smarcc2Q6PDG5 1213 aa15.78■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Urb2E9Q7L1 1524 aaKnown RBP15.77■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Lrrc23O35125 340 aa15.77■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Pabpn1lQ5XFR0 273 aa15.77■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Zfp397Q7TNK4 527 aa15.77■□□□□ 0.12
Col5a1-201ENSMUST00000028280 Jade3Q6IE82 823 aa15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Ccdc7Q9D541 371 aa15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Dhx9O70133 1380 aaKnown RBP15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Kmt5bQ3U8K7 883 aa15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Usp37Q8C0R0 979 aa15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Tspyl2Q7TQI8 677 aa15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Smarca5Q91ZW3 1051 aaKnown RBP15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Amotl1Q9D4H4 968 aa15.77■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Brd1E9PZ26 1189 aaKnown RBP15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Terf2O35144 541 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 RbsnQ80Y56 783 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Tmem87bQ8BKU8 555 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 ApobrQ8VBT6 942 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Ddx27Q921N6 760 aaKnown RBP15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Rab44Q8CB87 725 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Tbc1d8Q9Z1A9 1134 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Kif5aP33175 1027 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Tsr2Q8C8T8 191 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Tbc1d9Q3UYK3 1264 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 RragbQ6NTA4 374 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Ints8Q80V86 995 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Atad3Q925I1 591 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Tsnaxip1Q99P25 704 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 AmfrQ9R049 643 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Elp1Q7TT37 1333 aaKnown RBP15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Srgap1Q91Z69 1062 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Camsap2Q8C1B1 1461 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Hook2Q7TMK6 716 aa15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Riok3Q9DBU3 519 aaKnown RBP15.76■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Gm3409A0A0G2JE67 319 aa15.75■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Tldc2A2ACG1 198 aa15.75■□□□□ 0.11
Col5a1-201ENSMUST00000028280 Rabgap1A2AWA9 1064 aa15.75■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 87 ms