RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Trak2Q6P9N8 913 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Zc3h6Q8BYK8 1177 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Phc3Q8CHP6 981 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Zbtb12Q9Z150 459 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Med1Q925J9 1575 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 C5P06684 1680 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Cwc27Q3TKY6 469 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Farp2Q91VS8 1065 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 CenppQ9CZ92 286 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Tmem2Q5FWI3 1383 aa13.47□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Surf1P09925 306 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ccdc162pQ0VG85 912 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Arhgef1Q61210 920 aaKnown RBP13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Tpm4Q6IRU2 248 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Vps18Q8R307 973 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Synpo2Q91YE8 1087 aaKnown RBP13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Lrrc6O88978 473 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Irx1P81068 480 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Mum1Q6DID5 682 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Btbd11Q6GQW0 1109 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Ccdc178Q8CDV0 866 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Kcnh5Q920E3 988 aa13.46□□□□□ -0.25
Sdc1-201ENSMUST00000020911 Gm21698A0A087WQP8 267 aa13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Gm21671G3UY31 267 aa13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Gnai2P08752 355 aaKnown RBP13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Atf3Q60765 181 aa13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Wdr24Q8CFJ9 790 aa13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Tshz3Q8CGV9 1081 aa13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Cnpy2Q9QXT0 182 aa13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Zranb2Q9R020 330 aaKnown RBP13.46□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Cnbd1B1AWM0 430 aa13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ccdc102aQ3TMW1 549 aa13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ppp1r42Q8R1Z4 357 aa13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Kri1Q8VDQ9 704 aaKnown RBP13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Med4Q9CQA5 270 aa13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Q9D2X8 372 aa13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Foxp4Q9DBY0 795 aaKnown RBP13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ube2hP62257 183 aa13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Fam50bQ9WTJ8 334 aa13.45□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Kif3cO35066 796 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Slc4a10Q5DTL9 1118 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Cgnl1Q6AW69 1298 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Als2Q920R0 1651 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Zranb3Q6NZP1 1069 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 DpydQ8CHR6 1025 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 SarnpQ9D1J3 210 aaKnown RBP13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Bcar3Q9QZK2 820 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Nap1l2P51860 460 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Tyro3P55144 880 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Tm6sf1P58749 370 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Mns1Q61884 491 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Lrrc8aQ80WG5 810 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ddx27Q921N6 760 aaKnown RBP13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Cyp46a1Q9WVK8 500 aa13.44□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Cd22P35329 862 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 EvcP57680 1005 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Znf697Q569E7 569 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Aldh1l2Q8K009 923 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Atg4a-psA0A0G2JFS9 396 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Dhx8A2A4P0 1244 aaKnown RBP13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Uri1Q3TLD5 531 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Atg4aQ8C9S8 396 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Anapc4Q91W96 807 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Mis12Q9CY25 206 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Tpcn1Q9EQJ0 817 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Spata31d1bE9QA57 1361 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 NalcnQ8BXR5 1738 aa13.43□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Calcoco2A2A6M5 331 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Zap70P43404 618 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Plcb3P51432 1234 aaKnown RBP13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Nkx2-3P97334 362 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Foxd1Q61345 456 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Fhod1Q6P9Q4 1197 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Amotl1Q9D4H4 968 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Kifc2O08672 792 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Hmx1O70218 332 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 CalrP14211 416 aaKnown RBP13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Gtf2f1Q3THK3 508 aaKnown RBP13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Mphosph10Q810V0 681 aaKnown RBP13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Dact1Q8R4A3 778 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Gcc1Q9D4H2 778 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Nphp1Q9QY53 687 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Mad1l1Q9WTX8 717 aaKnown RBP13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Gm3409A0A0G2JE67 319 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 CgnP59242 1191 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Ncoa4Q5U4H9 625 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Tmco3Q8BH01 678 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Q8CEZ4 452 aa13.42□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Topaz1E5FYH1 1653 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Rims2Q9EQZ7 1530 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Hmox1P14901 289 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Mcm2P97310 904 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Snw1Q9CSN1 536 aaKnown RBP13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Sipa1l2Q80TE4 1722 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Mon2Q80TL7 1715 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Disp3A3KFU9 1347 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Map9Q3TRR0 646 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Naif1Q6PFD7 327 aa13.41□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Tbc1d2B1AVH7 922 aa13.4□□□□□ -0.26
Sdc1-201ENSMUST00000020911 Hsp90b1P08113 802 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 20.1 ms